RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PNMA5Q96PV4 448 aa8.81□□□□□ -1
HPS4-205ENST00000429411 SPZ1Q9BXG8 430 aa8.81□□□□□ -1
HPS4-205ENST00000429411 FGFBP2Q9BYJ0 223 aa8.81□□□□□ -1
HPS4-205ENST00000429411 MAGEF1Q9HAY2 307 aa8.81□□□□□ -1
HPS4-205ENST00000429411 HDAC9Q9UKV0 1011 aa8.81□□□□□ -1
HPS4-205ENST00000429411 SPEF2Q9C093 1822 aa8.81□□□□□ -1
HPS4-205ENST00000429411 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 GOLGA6L7A0A1B0GV03 622 aa8.81□□□□□ -1
HPS4-205ENST00000429411 ERLIN2O94905 339 aa8.81□□□□□ -1
HPS4-205ENST00000429411 SYF2O95926 243 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 EPB41P11171 864 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 PRPHP41219 470 aa8.81□□□□□ -1
HPS4-205ENST00000429411 SP4Q02446 784 aa8.81□□□□□ -1
HPS4-205ENST00000429411 LRRC63Q05C16 580 aa8.81□□□□□ -1
HPS4-205ENST00000429411 CTTNQ14247 550 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 PAPD7Q5XG87 772 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 WDR93Q6P2C0 686 aa8.81□□□□□ -1
HPS4-205ENST00000429411 PDXDC1Q6P996 788 aa8.81□□□□□ -1
HPS4-205ENST00000429411 MMTAG2Q9BU76 263 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 MTMR4Q9NYA4 1195 aa8.81□□□□□ -1
HPS4-205ENST00000429411 CHORDC1Q9UHD1 332 aaPredicted RBP8.81□□□□□ -1
HPS4-205ENST00000429411 CAPN7Q9Y6W3 813 aa8.81□□□□□ -1
HPS4-205ENST00000429411 MYH6P13533 1939 aa8.81□□□□□ -1
HPS4-205ENST00000429411 UNCXA6NJT0 531 aa8.81□□□□□ -1
HPS4-205ENST00000429411 MAP2K1Q02750 393 aaPredicted RBP8.81□□□□□ -1
HPS4-205ENST00000429411 TRADDQ15628 312 aa8.81□□□□□ -1
HPS4-205ENST00000429411 SHROOM1Q2M3G4 852 aaPredicted RBP8.81□□□□□ -1
HPS4-205ENST00000429411 KRT71Q3SY84 523 aa8.81□□□□□ -1
HPS4-205ENST00000429411 ASPRV1Q53RT3 343 aa8.81□□□□□ -1
HPS4-205ENST00000429411 NIM1KQ8IY84 436 aa8.81□□□□□ -1
HPS4-205ENST00000429411 ZNF784Q8NCA9 323 aaPredicted RBP8.81□□□□□ -1
HPS4-205ENST00000429411 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
HPS4-205ENST00000429411 CTNNBL1Q8WYA6 563 aaPredicted RBP8.81□□□□□ -1
HPS4-205ENST00000429411 ERGIC2Q96RQ1 377 aa8.81□□□□□ -1
HPS4-205ENST00000429411 RTFDC1Q9BY42 306 aaPredicted RBP8.81□□□□□ -1
HPS4-205ENST00000429411 NT5C3AQ9H0P0 336 aa8.81□□□□□ -1
HPS4-205ENST00000429411 RGL1Q9NZL6 768 aa8.81□□□□□ -1
HPS4-205ENST00000429411 KLHL42Q9P2K6 505 aa8.81□□□□□ -1
HPS4-205ENST00000429411 SALL4Q9UJQ4 1053 aa8.81□□□□□ -1
HPS4-205ENST00000429411 DAGLAQ9Y4D2 1042 aa8.81□□□□□ -1
HPS4-205ENST00000429411 ADAMTS7Q9UKP4 1686 aa8.8□□□□□ -1
HPS4-205ENST00000429411 TAF1P21675 1872 aa8.8□□□□□ -1
HPS4-205ENST00000429411 PNMA6FA0A0J9YX94 578 aa8.8□□□□□ -1
HPS4-205ENST00000429411 SERPING1P05155 500 aa8.8□□□□□ -1
HPS4-205ENST00000429411 GLI1P08151 1106 aa8.8□□□□□ -1
HPS4-205ENST00000429411 FAM153BP0C7A2 387 aa8.8□□□□□ -1
HPS4-205ENST00000429411 ATP2B4P23634 1241 aa8.8□□□□□ -1
HPS4-205ENST00000429411 COPB2P35606 906 aa8.8□□□□□ -1
HPS4-205ENST00000429411 GJC1P36383 396 aa8.8□□□□□ -1
HPS4-205ENST00000429411 QRICH1Q2TAL8 776 aa8.8□□□□□ -1
HPS4-205ENST00000429411 FAM153CQ494X1 144 aa8.8□□□□□ -1
HPS4-205ENST00000429411 HAUS3Q68CZ6 603 aa8.8□□□□□ -1
HPS4-205ENST00000429411 ALKBH5Q6P6C2 394 aaKnown RBP8.8□□□□□ -1
HPS4-205ENST00000429411 CREG2Q8IUH2 290 aa8.8□□□□□ -1
HPS4-205ENST00000429411 ZIM3Q96PE6 472 aa8.8□□□□□ -1
HPS4-205ENST00000429411 EFCC1Q9HA90 598 aa8.8□□□□□ -1
HPS4-205ENST00000429411 FAM153AQ9UHL3 310 aa8.8□□□□□ -1
HPS4-205ENST00000429411 CTDP1Q9Y5B0 961 aaPredicted RBP8.8□□□□□ -1
HPS4-205ENST00000429411 MYH7P12883 1935 aa8.8□□□□□ -1
HPS4-205ENST00000429411 MYH15Q9Y2K3 1946 aa8.8□□□□□ -1
HPS4-205ENST00000429411 TJP1Q07157 1748 aa8.8□□□□□ -1
HPS4-205ENST00000429411 MYH13Q9UKX3 1938 aa8.8□□□□□ -1
HPS4-205ENST00000429411 RSPH10B2B2RC85 870 aa8.8□□□□□ -1
HPS4-205ENST00000429411 TULP2O00295 520 aa8.8□□□□□ -1
HPS4-205ENST00000429411 RSPH10BP0C881 870 aa8.8□□□□□ -1
HPS4-205ENST00000429411 SCP2P22307 547 aa8.8□□□□□ -1
HPS4-205ENST00000429411 SEC24CP53992 1094 aa8.8□□□□□ -1
HPS4-205ENST00000429411 ZNF211Q13398 564 aaPredicted RBP8.8□□□□□ -1
HPS4-205ENST00000429411 CDC37Q16543 378 aaPredicted RBP8.8□□□□□ -1
HPS4-205ENST00000429411 NBPF9Q3BBW0 867 aa8.8□□□□□ -1
HPS4-205ENST00000429411 CERKLQ49MI3 558 aaPredicted RBP8.8□□□□□ -1
HPS4-205ENST00000429411 CENPPQ6IPU0 288 aa8.8□□□□□ -1
HPS4-205ENST00000429411 C16orf86Q6ZW13 317 aa8.8□□□□□ -1
HPS4-205ENST00000429411 PPM1EQ8WY54 764 aa8.8□□□□□ -1
HPS4-205ENST00000429411 ANO3Q9BYT9 981 aa8.8□□□□□ -1
HPS4-205ENST00000429411 IKZF4Q9H2S9 585 aa8.8□□□□□ -1
HPS4-205ENST00000429411 PCIF1Q9H4Z3 704 aa8.8□□□□□ -1
HPS4-205ENST00000429411 JMJD4Q9H9V9 463 aa8.8□□□□□ -1
HPS4-205ENST00000429411 RIC8AQ9NPQ8 531 aa8.8□□□□□ -1
HPS4-205ENST00000429411 KCNQ5Q9NR82 932 aa8.8□□□□□ -1
HPS4-205ENST00000429411 GCNT4Q9P109 453 aa8.8□□□□□ -1
HPS4-205ENST00000429411 RPS6KL1Q9Y6S9 549 aa8.8□□□□□ -1
HPS4-205ENST00000429411 PKD1L3Q7Z443 1732 aa8.8□□□□□ -1
HPS4-205ENST00000429411 PVALEFA0A1B0GWK0 134 aa8.79□□□□□ -1
HPS4-205ENST00000429411 IRAK1P51617 712 aa8.79□□□□□ -1
HPS4-205ENST00000429411 CDR1P51861 262 aa8.79□□□□□ -1
HPS4-205ENST00000429411 ICA1Q05084 483 aa8.79□□□□□ -1
HPS4-205ENST00000429411 NFIAQ12857 509 aa8.79□□□□□ -1
HPS4-205ENST00000429411 IFT88Q13099 833 aa8.79□□□□□ -1
HPS4-205ENST00000429411 SEPT2Q15019 361 aa8.79□□□□□ -1
HPS4-205ENST00000429411 ECM1Q16610 540 aa8.79□□□□□ -1
HPS4-205ENST00000429411 HS2ST1Q7LGA3 356 aa8.79□□□□□ -1
HPS4-205ENST00000429411 HOMER2Q9NSB8 354 aa8.79□□□□□ -1
HPS4-205ENST00000429411 FAM169AQ9Y6X4 670 aa8.79□□□□□ -1
HPS4-205ENST00000429411 PLEKHG2Q9H7P9 1386 aa8.79□□□□□ -1
HPS4-205ENST00000429411 FLOT1O75955 427 aa8.79□□□□□ -1
HPS4-205ENST00000429411 H2AFZP0C0S5 128 aa8.79□□□□□ -1
HPS4-205ENST00000429411 RDXP35241 583 aaKnown RBP8.79□□□□□ -1
HPS4-205ENST00000429411 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
HPS4-205ENST00000429411 H2AFVQ71UI9 128 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms