RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CCNE1P24864 410 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 YWHABP31946 246 aaKnown RBP10.07□□□□□ -0.8
NR1I3-209ENST00000428574 PRCPP42785 496 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 RARRES1P49788 294 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 RTP1P59025 263 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 COASYQ13057 564 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
NR1I3-209ENST00000428574 MAP2K5Q13163 448 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 GIT2Q14161 759 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 CTTNQ14247 550 aaKnown RBP10.07□□□□□ -0.8
NR1I3-209ENST00000428574 BMT2Q1RMZ1 405 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 WDR78Q5VTH9 848 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 CDKAL1Q5VV42 579 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 CENPPQ6IPU0 288 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 RINT1Q6NUQ1 792 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 ARMCX2Q7L311 632 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 FAM114A1Q8IWE2 563 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 MCPH1Q8NEM0 835 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 ANKRD20A12PQ8NF67 263 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 USP6NLQ92738 828 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 MAML3Q96JK9 1138 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 DRC1Q96MC2 740 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
NR1I3-209ENST00000428574 ABHD16BQ9H3Z7 469 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 THAP9Q9H5L6 903 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
NR1I3-209ENST00000428574 NFE2L3Q9Y4A8 694 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
NR1I3-209ENST00000428574 KIAA1217Q5T5P2 1943 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 LRRC10BA6NIK2 292 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 GOLGA6L6A8MZA4 724 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 COBLO75128 1261 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 LGR5O75473 907 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 ADCY5O95622 1261 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 PGK2P07205 417 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 XRCC5P13010 732 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 IDEP14735 1019 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 CASP1P29466 404 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 RGS2P41220 211 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 APLP1P51693 650 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 SNRPFP62306 86 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 PSMC6P62333 389 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 LAMC2Q13753 1193 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 NFIL3Q16649 462 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 EDRF1Q3B7T1 1238 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 CELF3Q5SZQ8 465 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 TTI2Q6NXR4 508 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 DYMQ7RTS9 669 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 PLPPR4Q7Z2D5 763 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 DPP9Q86TI2 863 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 TRMT44Q8IYL2 757 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 MYOCDQ8IZQ8 938 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 KIAA0895Q8NCT3 520 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 NELFBQ8WX92 580 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 SEPT1Q8WYJ6 367 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 P2RX5Q93086 422 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 HVCN1Q96D96 273 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 APBA2Q99767 749 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 REEP2Q9BRK0 252 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 TINF2Q9BSI4 451 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 KATNBL1Q9H079 304 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 ST6GALNAC4Q9H4F1 302 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 PARVGQ9HBI0 331 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 LARSQ9P2J5 1176 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 CGNQ9P2M7 1197 aaKnown RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 WRAP73Q9P2S5 460 aaPredicted RBP10.06□□□□□ -0.8
NR1I3-209ENST00000428574 SSUH2Q9Y2M2 353 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 THSD7BQ9C0I4 1608 aa10.06□□□□□ -0.8
NR1I3-209ENST00000428574 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-209ENST00000428574 H0YCG3 227 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 DDX39AO00148 427 aaKnown RBP10.05□□□□□ -0.8
NR1I3-209ENST00000428574 PEX10O60683 326 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 DGAT1O75907 488 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 FAM13AO94988 1023 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 GGPS1O95749 300 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 IGHA2P01877 340 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-209ENST00000428574 MAP2K2P36507 400 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 RFC5P40937 340 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 ZNF75DP51815 510 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 SP2Q02086 613 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 STK4Q13043 487 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 DEFB115Q30KQ5 88 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 ZCWPW2Q504Y3 356 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 HERC4Q5GLZ8 1057 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-209ENST00000428574 IQSEC1Q6DN90 963 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 ISM2Q6H9L7 571 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 SEPT14Q6ZU15 432 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 CYFIP1Q7L576 1253 aa10.05□□□□□ -0.8
NR1I3-209ENST00000428574 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-209ENST00000428574 ZC3H3Q8IXZ2 948 aaKnown RBP10.05□□□□□ -0.8
NR1I3-209ENST00000428574 BANK1Q8NDB2 785 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms