RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 NAGPAQ9UK23 515 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 MTUS1Q9ULD2 1270 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 M0R2N6 131 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 RPSAP08865 295 aaKnown RBP11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 UCHL3P15374 230 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 ZNF76P36508 570 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 SCTRP47872 440 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 CETN1Q12798 172 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 IKQ13123 557 aaPredicted RBP11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 CALCOCO2Q13137 446 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 STXBP4Q6ZWJ1 553 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 TRADDQ15628 312 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 EDRF1Q3B7T1 1238 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 ANKRD20A8PQ5CZ79 823 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 C6orf118Q5T5N4 469 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 HS2ST1Q7LGA3 356 aa11.71□□□□□ -0.54
ATP2C1-204ENST00000428331 TRPM3Q9HCF6 1732 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 MPHOSPH10O00566 681 aaKnown RBP11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 CCDC25Q86WR0 208 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 UIMC1Q96RL1 719 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 PSTPIP2Q9H939 334 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 SUCLA2Q9P2R7 463 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 CHD4Q14839 1912 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 E9PMD0 336 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 RASA1P20936 1047 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 SEL1L2Q5TEA6 688 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 FRMD5Q7Z6J6 570 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 PROCA1Q8NCQ7 364 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 TPCN2Q8NHX9 752 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 PKD1L3Q7Z443 1732 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 CCT8L1PA6NM43 557 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 TLR2O60603 784 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 ATP5DP30049 168 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 LACTBP83111 547 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 SCFD2Q8WU76 684 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 PLVAPQ9BX97 442 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 IFNAR2P48551 515 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 EIF6P56537 245 aaKnown RBP11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 ADCY2Q08462 1091 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 CCHCR1Q8TD31 782 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 ELAC2Q9BQ52 826 aaKnown RBP11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 GCNT4Q9P109 453 aa11.7□□□□□ -0.54
ATP2C1-204ENST00000428331 BCL9O00512 1426 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 USP17L5A8MUK1 530 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 GFPT2O94808 682 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 GCNT3O95395 438 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 ACTN1P12814 892 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 HSPA6P17066 643 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 SLC9A1P19634 815 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 SLC37A4O43826 429 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 NEBLO76041 1014 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 GHRP10912 638 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 BTDP43251 543 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 PMS2P54278 862 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 RUNDC3BQ96NL0 473 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 PLCD4Q9BRC7 762 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 KCNK9Q9NPC2 374 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 CTTNBP2NLQ9P2B4 639 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 PNMA2Q9UL42 364 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 DUOX1Q9NRD9 1551 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 CFAP73A6NFT4 308 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 WTIPA6NIX2 430 aaPredicted RBP11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 BTNL10A8MVZ5 291 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 FAM13AO94988 1023 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 UBE2SQ16763 222 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 TBC1D1Q86TI0 1168 aaPredicted RBP11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 SLFN12Q8IYM2 578 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 LRRC15Q8TF66 581 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 PIK3R5Q8WYR1 880 aa11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 CDCA7Q9BWT1 371 aaPredicted RBP11.69□□□□□ -0.54
ATP2C1-204ENST00000428331 TMEM110-MUSTN1A8MSY1 372 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 RASSF9O75901 435 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 SUN1O94901 812 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 ZNF571Q7Z3V5 609 aaPredicted RBP11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 TMC3Q7Z5M5 1100 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 UHMK1Q8TAS1 419 aaKnown RBP11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 TATDN2Q93075 761 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 INTUQ9ULD6 942 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 SNX24Q9Y343 169 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 PARP4Q9UKK3 1724 aaKnown RBP11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 NKRFO15226 690 aaKnown RBP eCLIP11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 PDE6CP51160 858 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 KNOP1Q1ED39 458 aaKnown RBP11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 FAM133BQ5BKY9 247 aaKnown RBP11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 CELF4Q9BZC1 486 aaKnown RBP11.68□□□□□ -0.54
ATP2C1-204ENST00000428331 TPX2Q9ULW0 747 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms