RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TMEM62Q0P6H9 643 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 FAM160B1Q5W0V3 765 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 MIS18BP1Q6P0N0 1132 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 PDXDC2PQ6P474 469 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 CPLX2Q6PUV4 134 aaKnown RBP20.88■□□□□ 0.93
PSPC1-202ENST00000427943 TNPO1Q92973 898 aaKnown RBP20.88■□□□□ 0.93
PSPC1-202ENST00000427943 LENG9Q96B70 501 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 INSL6Q9Y581 213 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 ATG2AQ2TAZ0 1938 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 VCANP13611 3396 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 KIAA1671Q9BY89 1806 aa20.88■□□□□ 0.93
PSPC1-202ENST00000427943 EDIL3O43854 480 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 SLC26A2P50443 739 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 HTRA4P83105 476 aaPredicted RBP20.87■□□□□ 0.93
PSPC1-202ENST00000427943 SCRN1Q12765 414 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 FBXO47Q5MNV8 452 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 SWSAP1Q6NVH7 229 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 TGS1Q96RS0 853 aaKnown RBP20.87■□□□□ 0.93
PSPC1-202ENST00000427943 TBC1D22BQ9NU19 505 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 TCEAL9Q9UHQ7 104 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 TTC3P53804 2025 aa20.87■□□□□ 0.93
PSPC1-202ENST00000427943 TCF20Q9UGU0 1960 aaKnown RBP20.86■□□□□ 0.93
PSPC1-202ENST00000427943 COL4A6Q14031 1691 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 HBP1O60381 514 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 LPXNO60711 386 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 ERVK-21P61565 698 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 ZNF746Q6NUN9 644 aaPredicted RBP20.86■□□□□ 0.93
PSPC1-202ENST00000427943 MTHFD1LQ6UB35 978 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 TSHZ1Q6ZSZ6 1077 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 TRMT1LQ7Z2T5 733 aaKnown RBP20.86■□□□□ 0.93
PSPC1-202ENST00000427943 CKAP2LQ8IYA6 745 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 TBCKQ8TEA7 893 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 ATP8B4Q8TF62 1192 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 TOP1MTQ969P6 601 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 YME1L1Q96TA2 773 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 PCDHA4Q9UN74 947 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 PCDHA2Q9Y5H9 948 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 TRPV2Q9Y5S1 764 aa20.86■□□□□ 0.93
PSPC1-202ENST00000427943 M0QZ92 97 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 POU3F3P20264 500 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-202ENST00000427943 ATP4AP20648 1035 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 KLRC1P26715 233 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 CD52P31358 61 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 KRT76Q01546 638 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 SKIV2LQ15477 1246 aaKnown RBP20.85■□□□□ 0.93
PSPC1-202ENST00000427943 BLIDQ8IZY5 108 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 SP7Q8TDD2 431 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-202ENST00000427943 C17orf80Q9BSJ5 609 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 SLKQ9H2G2 1235 aaPredicted RBP20.85■□□□□ 0.93
PSPC1-202ENST00000427943 AGO3Q9H9G7 860 aaKnown RBP20.85■□□□□ 0.93
PSPC1-202ENST00000427943 SUGCTQ9HAC7 445 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 TPCN1Q9ULQ1 816 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 SAMM50Q9Y512 469 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 COL1A2P08123 1366 aa20.85■□□□□ 0.93
PSPC1-202ENST00000427943 SMIM35A0A1B0GVV1 85 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 MSH4O15457 936 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 RPLP2P05387 115 aaKnown RBP20.84■□□□□ 0.93
PSPC1-202ENST00000427943 PSAPP07602 524 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 AK2P54819 239 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 NPY5RQ15761 445 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 TJAP1Q5JTD0 557 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 IER5Q5VY09 327 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 SMAP1Q8IYB5 467 aaPredicted RBP20.84■□□□□ 0.93
PSPC1-202ENST00000427943 GJA10Q969M2 543 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 GABBR1Q9UBS5 961 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 KCNJ14Q9UNX9 436 aa20.84■□□□□ 0.93
PSPC1-202ENST00000427943 M0R2N6 131 aa20.83■□□□□ 0.93
PSPC1-202ENST00000427943 TDP2O95551 362 aa20.83■□□□□ 0.93
PSPC1-202ENST00000427943 CENPBP07199 599 aaPredicted RBP20.83■□□□□ 0.93
PSPC1-202ENST00000427943 USP11P51784 963 aa20.83■□□□□ 0.93
PSPC1-202ENST00000427943 ANAPC15P60006 121 aa20.83■□□□□ 0.93
PSPC1-202ENST00000427943 DAGLBQ8NCG7 672 aa20.83■□□□□ 0.93
PSPC1-202ENST00000427943 ATXN2LQ8WWM7 1075 aaKnown RBP20.83■□□□□ 0.93
PSPC1-202ENST00000427943 PCDHA10Q9Y5I2 948 aa20.83■□□□□ 0.93
PSPC1-202ENST00000427943 MAFBQ9Y5Q3 323 aaPredicted RBP20.83■□□□□ 0.93
PSPC1-202ENST00000427943 IGSF9BQ9UPX0 1349 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 ZBTB42B2RXF5 422 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 CHMP2AO43633 222 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 CDKL5O76039 1030 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 ZNF484Q5JVG2 852 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 FBXO22Q8NEZ5 403 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 LINC01599Q8WXQ3 324 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 CELF4Q9BZC1 486 aaKnown RBP20.82■□□□□ 0.92
PSPC1-202ENST00000427943 TSPYL2Q9H2G4 693 aaPredicted RBP20.82■□□□□ 0.92
PSPC1-202ENST00000427943 GINS2Q9Y248 185 aa20.82■□□□□ 0.92
PSPC1-202ENST00000427943 STK36Q9NRP7 1315 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 SPTBN5Q9NRC6 3674 aaKnown RBP20.81■□□□□ 0.92
PSPC1-202ENST00000427943 WDR64B1ANS9 1081 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 ENPP3O14638 875 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 PFKFB2O60825 505 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 GAS7O60861 476 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 LRCH2Q5VUJ6 765 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 BBXQ8WY36 941 aaPredicted RBP20.81■□□□□ 0.92
PSPC1-202ENST00000427943 ASB2Q96Q27 587 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 PPP1R16BQ96T49 567 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 TEKT3Q9BXF9 490 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 C22orf23Q9BZE7 217 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 UNC45AQ9H3U1 944 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
PSPC1-202ENST00000427943 LARGE1O95461 756 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms