RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 JPH1Q9HDC5 661 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-204ENST00000427724 MTUS1Q9ULD2 1270 aa11.61□□□□□ -0.55
TCOF1-204ENST00000427724 FAN1Q9Y2M0 1017 aa11.61□□□□□ -0.55
TCOF1-204ENST00000427724 PFASO15067 1338 aa11.61□□□□□ -0.55
TCOF1-204ENST00000427724 CYP2C9P11712 490 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 PTPRAP18433 802 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 RESP18Q5W5W9 173 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 AMIGO3Q86WK7 504 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 FBXO16Q8IX29 292 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-204ENST00000427724 LOC102724159A0A0B4J2E5 919 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 MYBP10242 640 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 MORC3Q14149 939 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 PWP2Q15269 919 aaKnown RBP11.6□□□□□ -0.55
TCOF1-204ENST00000427724 SLC35F6Q8N357 371 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 TCP11Q8WWU5 503 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 NAA15Q9BXJ9 866 aaKnown RBP11.6□□□□□ -0.55
TCOF1-204ENST00000427724 KCNJ18B7U540 433 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 PDHBP11177 359 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 THPOP40225 353 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 PHKA2P46019 1235 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 KCNJ12Q14500 433 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 ENOX1Q8TC92 643 aaKnown RBP11.6□□□□□ -0.55
TCOF1-204ENST00000427724 CD99L2Q8TCZ2 262 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 PCDHA10Q9Y5I2 948 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 ASTN2O75129 1339 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-204ENST00000427724 NDUFAB1O14561 156 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 AOC2O75106 756 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 TNNC1P63316 161 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 TOGARAM2Q6ZUX3 1019 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 HOOK3Q86VS8 718 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 ACRBPQ8NEB7 543 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 URGCPQ8TCY9 931 aa11.6□□□□□ -0.55
TCOF1-204ENST00000427724 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-204ENST00000427724 ZNF512BQ96KM6 892 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-204ENST00000427724 FLT3LGP49771 235 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 CPT1AP50416 773 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 PPIL2Q13356 520 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 DGKDQ16760 1214 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 MAATS1Q7Z4T9 603 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 KIFAP3Q92845 792 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 TAAR1Q96RJ0 339 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 PARD6BQ9BYG5 372 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 EPB41L4AQ9HCS5 686 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-204ENST00000427724 XPNPEP3Q9NQH7 507 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 PPP1R9AQ9ULJ8 1098 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 YDJCA8MPS7 323 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 ADORA2AP29274 412 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 TRIM14Q14142 442 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 LARP4BQ92615 738 aaKnown RBP11.59□□□□□ -0.55
TCOF1-204ENST00000427724 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 HTATIP2Q9BUP3 242 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 CCDC113Q9H0I3 377 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 SENP2Q9HC62 589 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 FAM207AQ9NSI2 230 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-204ENST00000427724 PIN4Q9Y237 131 aaKnown RBP11.59□□□□□ -0.55
TCOF1-204ENST00000427724 SYNJ2BP-COX16A0A087WUM0 186 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 ENC1O14682 589 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 ERCC5P28715 1186 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-204ENST00000427724 ANTXR2P58335 489 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 IER5Q5VY09 327 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 RBM43Q6ZSC3 357 aaKnown RBP11.59□□□□□ -0.55
TCOF1-204ENST00000427724 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 COX16Q9P0S2 106 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 ANKRD26Q9UPS8 1709 aa11.59□□□□□ -0.55
TCOF1-204ENST00000427724 POTEMA6NI47 508 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 APLP1P51693 650 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 TUBB4BP68371 445 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 GLYCTKQ8IVS8 523 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 SNX25Q9H3E2 840 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 SMARCAD1Q9H4L7 1026 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 TOPORSQ9NS56 1045 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-204ENST00000427724 PTPRZ1P23471 2315 aaPredicted RBP11.58□□□□□ -0.56
TCOF1-204ENST00000427724 GUCY1A2P33402 732 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 QARSP47897 775 aaKnown RBP11.58□□□□□ -0.56
TCOF1-204ENST00000427724 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
TCOF1-204ENST00000427724 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 ERVK-24P63145 666 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 BRD3Q15059 726 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 LRRC41Q15345 812 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 METTL16Q86W50 562 aaKnown RBP11.58□□□□□ -0.56
TCOF1-204ENST00000427724 OR8K1Q8NGG5 319 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 EXOC4Q96A65 974 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 FAM149B1Q96BN6 582 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 GCNAQ96QF7 691 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 BPIFA3Q9BQP9 254 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 CDC23Q9UJX2 597 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 TMX2Q9Y320 296 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 TTLL3Q9Y4R7 772 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 GOLGA6CA6NDK9 693 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 PABPN1LA6NDY0 278 aaKnown RBP11.58□□□□□ -0.56
TCOF1-204ENST00000427724 DPYSL4O14531 572 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 STRNO43815 780 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 HSF2BPO75031 334 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 RPS6KA5O75582 802 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 GOLGA6DP0CG33 693 aa11.58□□□□□ -0.56
TCOF1-204ENST00000427724 ELNP15502 786 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms