RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 MCF2LO15068 1137 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 PPFIA2O75334 1257 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 KITP10721 976 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 NCF2P19878 526 aaPredicted RBP14.2□□□□□ -0.14
SPG11-202ENST00000427534 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
SPG11-202ENST00000427534 DYDC2Q96IM9 177 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 PNMA3Q9UL41 463 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 H0YCG3 227 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 SRGAP2O75044 1071 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 LARGE1O95461 756 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 SRGAP2BP0DMP2 458 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 BRINP3Q76B58 766 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 SAAL1Q96ER3 474 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 CCDC17Q96LX7 622 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.2□□□□□ -0.14
SPG11-202ENST00000427534 LCP1P13796 627 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 HMGCS2P54868 508 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 SIRT2Q8IXJ6 389 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 TMEM106CQ9BVX2 250 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 MAN1B1Q9UKM7 699 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 ZNF449Q6P9G9 518 aa14.2□□□□□ -0.14
SPG11-202ENST00000427534 CCDC195A0A1B0GUA6 201 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 SPECC1L-ADORA2AF8WAN1 911 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 C2CD2LO14523 706 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 CYP2B6P20813 491 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 PSMA2P25787 234 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 COG7P83436 770 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 ASPHQ12797 758 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 SLC39A14Q15043 492 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 MUM1Q2TAK8 710 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 CCDC78A2IDD5 438 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 ARHGAP4P98171 946 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 MXD4Q14582 209 aaPredicted RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 RNF135Q8IUD6 432 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 MAP7D3Q8IWC1 876 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 ZNF507Q8TCN5 953 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 PPP1R36Q96LQ0 422 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 PARVGQ9HBI0 331 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 EMILIN3Q9NT22 766 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 GINM1Q9NU53 330 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 PTPN12Q05209 780 aaKnown RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 TMEM259Q4ZIN3 620 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 TCP11X2Q5H9J9 407 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 C11orf57Q6ZUT1 292 aaPredicted RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 THEM5Q8N1Q8 247 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 TRIM58Q8NG06 486 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 CDKL2Q92772 493 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 ATXN7L3BQ96GX2 97 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 KCNG1Q9UIX4 513 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 CDK12Q9NYV4 1490 aaPredicted RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 CLNS1AP54105 237 aaKnown RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 MTMR2Q13614 643 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 DPCR1Q3MIW9 517 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 SPATA1Q5VX52 437 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 SLC35F6Q8N357 371 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 NPHP3-ACAD11A0A0J9YXS1 232 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 FOSP01100 380 aaPredicted RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 VCPP55072 806 aaKnown RBP14.19□□□□□ -0.14
SPG11-202ENST00000427534 WHAMMQ8TF30 809 aa14.19□□□□□ -0.14
SPG11-202ENST00000427534 PCSK1NQ9UHG2 260 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 FBXL5Q9UKA1 691 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 PCDHA5Q9Y5H7 936 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 LRRC8CQ8TDW0 803 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 RPAP3Q9H6T3 665 aaPredicted RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 ATP10DQ9P241 1426 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 PRR23AA6NEV1 266 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 STXBP2Q15833 593 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 TRIM67Q6ZTA4 783 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 RNF10Q8N5U6 811 aaKnown RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 PSPC1Q8WXF1 523 aaKnown RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 FRA10AC1Q70Z53 315 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 TRMT10CQ7L0Y3 403 aaKnown RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 PPWD1Q96BP3 646 aaKnown RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 RAB3IPQ96QF0 476 aaPredicted RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 RNF26Q9BY78 433 aaPredicted RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 VCXQ9H320 206 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 GABBR1Q9UBS5 961 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 USH1CQ9Y6N9 552 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 ATP8B3O60423 1300 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 CFAP69A5D8W1 941 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 TRIM49BA6NDI0 452 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 SERPIND1P05546 499 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 PLS3P13797 630 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 NOP14P78316 857 aaKnown RBP14.18□□□□□ -0.14
SPG11-202ENST00000427534 URGCPQ8TCY9 931 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 P2RX5Q93086 422 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 SPON2Q9BUD6 331 aa14.18□□□□□ -0.14
SPG11-202ENST00000427534 TNPO2O14787 897 aaKnown RBP14.17□□□□□ -0.14
SPG11-202ENST00000427534 PPP6R2O75170 966 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 MTMR3Q13615 1198 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 DBN1Q16643 649 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 BBS9Q3SYG4 887 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 GAS2L3Q86XJ1 694 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 KRT82Q9NSB4 513 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
SPG11-202ENST00000427534 E9PMD0 336 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms