RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 RANBP6O60518 1105 aaKnown RBP10.72□□□□□ -0.69
LSG1-202ENST00000427461 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 GLULP15104 373 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 RFX1P22670 979 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 ZNF543Q08ER8 600 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 DMWDQ09019 674 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
LSG1-202ENST00000427461 KIAA1841Q6NSI8 718 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 IL31RAQ8NI17 732 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 RSAD2Q8WXG1 361 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 MRPS27Q92552 414 aaKnown RBP10.72□□□□□ -0.69
LSG1-202ENST00000427461 ZBTB10Q96DT7 871 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 SEC62Q99442 399 aaKnown RBP10.72□□□□□ -0.69
LSG1-202ENST00000427461 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 TBC1D17Q9HA65 648 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 PARD6AQ9NPB6 346 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 TYW1Q9NV66 732 aaKnown RBP10.72□□□□□ -0.69
LSG1-202ENST00000427461 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 LRFN2Q9ULH4 789 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 CCDC171Q6TFL3 1326 aa10.72□□□□□ -0.69
LSG1-202ENST00000427461 ANP32CO43423 234 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 CLASP2O75122 1294 aaKnown RBP10.71□□□□□ -0.69
LSG1-202ENST00000427461 LRRN2O75325 713 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 SLC3A2P08195 630 aaKnown RBP10.71□□□□□ -0.69
LSG1-202ENST00000427461 GNAT2P19087 354 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 PBX3P40426 434 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 ATAT1Q5SQI0 421 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 TMC7Q7Z402 723 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 ITPRIPQ8IWB1 547 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
LSG1-202ENST00000427461 PDCD2LQ9BRP1 358 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 USP26Q9BXU7 913 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 NAPBQ9H115 298 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 TMX1Q9H3N1 280 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 CWH43Q9H720 699 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 PADI3Q9ULW8 664 aa10.71□□□□□ -0.69
LSG1-202ENST00000427461 ABCB11O95342 1321 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
LSG1-202ENST00000427461 RNF113AO15541 343 aaKnown RBP10.7□□□□□ -0.7
LSG1-202ENST00000427461 CFBP00751 764 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 HSPD1P10809 573 aaKnown RBP10.7□□□□□ -0.7
LSG1-202ENST00000427461 TOP1P11387 765 aaKnown RBP10.7□□□□□ -0.7
LSG1-202ENST00000427461 RLBP1P12271 317 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 PLCB3Q01970 1234 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 TMEM62Q0P6H9 643 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 CDC37Q16543 378 aaPredicted RBP10.7□□□□□ -0.7
LSG1-202ENST00000427461 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 XRRA1Q6P2D8 792 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 KCNV1Q6PIU1 500 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 TMC5Q6UXY8 1006 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 GPR20Q99678 358 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 FTHL17Q9BXU8 183 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 NGRNQ9NPE2 291 aaKnown RBP10.7□□□□□ -0.7
LSG1-202ENST00000427461 WNT16Q9UBV4 365 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 LZTS1Q9Y250 596 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 SIT1Q9Y3P8 196 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 PCDHB7Q9Y5E2 793 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 ZFYVE26Q68DK2 2539 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 MYH6P13533 1939 aa10.7□□□□□ -0.7
LSG1-202ENST00000427461 NRCAMQ92823 1304 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 C2orf16Q68DN1 1984 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 C2orf71A6NGG8 1288 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 MGEA5O60502 916 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 ZIC2O95409 532 aaPredicted RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 EPCAMP16422 314 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 CA8P35219 290 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 MRPS6P82932 125 aaKnown RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 TMEM266Q2M3C6 531 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 TAF2Q6P1X5 1199 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 CYFIP1Q7L576 1253 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 RSPH3Q86UC2 560 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 VSIG10LQ86VR7 867 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 MCF2L2Q86YR7 1114 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 MRPL43Q8N983 215 aaKnown RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 KBTBD3Q8NAB2 608 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 ACSF2Q96CM8 615 aaPredicted RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 NACAP1Q9BZK3 213 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 FOXQ1Q9C009 403 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 FAM49AQ9H0Q0 323 aaPredicted RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 PUF60Q9UHX1 559 aaKnown RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 ANGPTL2Q9UKU9 493 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 SMG5Q9UPR3 1016 aaKnown RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.69□□□□□ -0.7
LSG1-202ENST00000427461 COL4A3Q01955 1670 aa10.69□□□□□ -0.7
LSG1-202ENST00000427461 OPLAHO14841 1288 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 SNHG28P0DPA3 235 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 TGFB3P10600 412 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 FGFR1P11362 822 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 PDE4AP27815 886 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 SARSP49591 514 aaKnown RBP10.68□□□□□ -0.7
LSG1-202ENST00000427461 SP4Q02446 784 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 PAK2Q13177 524 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 PGM5Q15124 567 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 MARCH8Q5T0T0 291 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 LRRC55Q6ZSA7 311 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 GPR152Q8TDT2 470 aa10.68□□□□□ -0.7
LSG1-202ENST00000427461 TUBE1Q9UJT0 475 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms