RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 HOXC9P31274 260 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 ZBTB18Q99592 522 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 TRIM55Q9BYV6 548 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 GCNT4Q9P109 453 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 GOLGA8MH3BSY2 632 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 PRPSAP2O60256 369 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 KDM1AO60341 852 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 TMEM247A6NEH6 219 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 ADGRB1O14514 1584 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 CARSP49589 748 aaKnown RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 CYP27A1Q02318 531 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
HDLBP-214ENST00000427183 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
HDLBP-214ENST00000427183 MMEP08473 750 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 DOK7Q18PE1 504 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 ANO4Q32M45 955 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 CACTINQ8WUQ7 758 aaKnown RBP13.47□□□□□ -0.25
HDLBP-214ENST00000427183 FAF2Q96CS3 445 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 KMT5AQ9NQR1 393 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 PYGBP11216 843 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 STAT2P52630 851 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-214ENST00000427183 BEND6Q5SZJ8 279 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-214ENST00000427183 RWDD4Q6NW29 188 aaKnown RBP13.47□□□□□ -0.25
HDLBP-214ENST00000427183 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
HDLBP-214ENST00000427183 SAYSD1Q9NPB0 183 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 SLC12A6Q9UHW9 1150 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 CDV3Q9UKY7 258 aaKnown RBP13.47□□□□□ -0.25
HDLBP-214ENST00000427183 PFKFB2O60825 505 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-214ENST00000427183 ZBED1O96006 694 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 SCRN1Q12765 414 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 TTC30AQ86WT1 665 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 PCDHA13Q9Y5I0 950 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 PPLO60437 1756 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 MYOM1P52179 1685 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 LRRC4Q9HBW1 653 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 ADA2Q9NZK5 511 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 DCTN4Q9UJW0 460 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 MED14O60244 1454 aa13.47□□□□□ -0.25
HDLBP-214ENST00000427183 GCP02774 474 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 CDC25AP30304 524 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 MECOMQ03112 1051 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 GCKRQ14397 625 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 USP6NLQ92738 828 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 P2RX5Q93086 422 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 TRIM11Q96F44 468 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 AS3MTQ9HBK9 375 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 CHCHD3Q9NX63 227 aaKnown RBP13.46□□□□□ -0.25
HDLBP-214ENST00000427183 SLC5A4Q9NY91 659 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 DDIT3P35638 169 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 BCAMP50895 628 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 FAM160B1Q5W0V3 765 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 CYP4F11Q9HBI6 524 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 ZFP69BQ9UJL9 534 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 PCDHA1Q9Y5I3 950 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 WDR64B1ANS9 1081 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 ATP8B1O43520 1251 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 ATP2B4P23634 1241 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 VCPP55072 806 aaKnown RBP13.46□□□□□ -0.25
HDLBP-214ENST00000427183 SF3B3Q15393 1217 aaKnown RBP13.46□□□□□ -0.25
HDLBP-214ENST00000427183 KIAA0825Q8IV33 1275 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 ZNF577Q9BSK1 485 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 SAMSN1Q9NSI8 373 aaKnown RBP13.46□□□□□ -0.25
HDLBP-214ENST00000427183 COPEO14579 308 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 VCAM1P19320 739 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 TRIM60Q495X7 471 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 TJAP1Q5JTD0 557 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 CENPUQ71F23 418 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 OSBPL1AQ9BXW6 950 aa13.46□□□□□ -0.25
HDLBP-214ENST00000427183 APOBEC2Q9Y235 224 aaKnown RBP13.46□□□□□ -0.25
HDLBP-214ENST00000427183 DCTN3O75935 186 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 ICA1Q05084 483 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 DEUP1Q05D60 604 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 C6orf118Q5T5N4 469 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 PBKQ96KB5 322 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 HEXIM2Q96MH2 286 aaKnown RBP13.46□□□□□ -0.26
HDLBP-214ENST00000427183 ALKQ9UM73 1620 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 PHLPP2Q6ZVD8 1323 aa13.46□□□□□ -0.26
HDLBP-214ENST00000427183 GFAPP14136 432 aa13.45□□□□□ -0.26
HDLBP-214ENST00000427183 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
HDLBP-214ENST00000427183 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
HDLBP-214ENST00000427183 IFNA8P32881 189 aa13.45□□□□□ -0.26
HDLBP-214ENST00000427183 TFDP1Q14186 410 aa13.45□□□□□ -0.26
HDLBP-214ENST00000427183 GSPT2Q8IYD1 628 aaKnown RBP13.45□□□□□ -0.26
HDLBP-214ENST00000427183 B4GALNT2Q8NHY0 566 aa13.45□□□□□ -0.26
HDLBP-214ENST00000427183 EXOC4Q96A65 974 aa13.45□□□□□ -0.26
HDLBP-214ENST00000427183 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
HDLBP-214ENST00000427183 KLC2Q9H0B6 622 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms