RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SWSAP1Q6NVH7 229 aa19.24■□□□□ 0.67
FN1-208ENST00000426059 PADI6Q6TGC4 694 aa19.24■□□□□ 0.67
FN1-208ENST00000426059 KCTD17Q8N5Z5 321 aa19.24■□□□□ 0.67
FN1-208ENST00000426059 MYCT1Q8N699 235 aa19.24■□□□□ 0.67
FN1-208ENST00000426059 CDHR1Q96JP9 859 aa19.24■□□□□ 0.67
FN1-208ENST00000426059 MROH8Q9H579 483 aa19.24■□□□□ 0.67
FN1-208ENST00000426059 THAP9Q9H5L6 903 aa19.24■□□□□ 0.67
FN1-208ENST00000426059 MRPL44Q9H9J2 332 aaKnown RBP19.24■□□□□ 0.67
FN1-208ENST00000426059 TRPM7Q96QT4 1865 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 PRPF6O94906 941 aaKnown RBP19.23■□□□□ 0.67
FN1-208ENST00000426059 FAM13AO94988 1023 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 TPM3P06753 285 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 ZBTB48P10074 688 aaPredicted RBP19.23■□□□□ 0.67
FN1-208ENST00000426059 PPP1R2P41236 205 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 RARRES1P49788 294 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 ZNF157P51786 506 aaPredicted RBP19.23■□□□□ 0.67
FN1-208ENST00000426059 ACTR2P61160 394 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 PSMC5P62195 406 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 KCNA1Q09470 495 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 ANKRD23Q86SG2 305 aa19.23■□□□□ 0.67
FN1-208ENST00000426059 DNAJC25-GNG10A0A024R161 153 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 PES1O00541 588 aaKnown RBP19.22■□□□□ 0.67
FN1-208ENST00000426059 USO1O60763 962 aaKnown RBP19.22■□□□□ 0.67
FN1-208ENST00000426059 NMT1P30419 496 aaKnown RBP19.22■□□□□ 0.67
FN1-208ENST00000426059 KSR1Q8IVT5 923 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 CCDC60Q8IWA6 550 aaPredicted RBP19.22■□□□□ 0.67
FN1-208ENST00000426059 CTAGE1Q96RT6 745 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 IKZF4Q9H2S9 585 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 IMPACTQ9P2X3 320 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 COL4A3BPQ9Y5P4 624 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 LRRC10BA6NIK2 292 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 BACH1O14867 736 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 ZNF862O60290 1169 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 LY6KQ17RY6 165 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 CNOT6LQ96LI5 555 aaKnown RBP19.22■□□□□ 0.67
FN1-208ENST00000426059 NFASCO94856 1347 aa19.22■□□□□ 0.67
FN1-208ENST00000426059 HIP1RO75146 1068 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 GCNT3O95395 438 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 UBA1P22314 1058 aaKnown RBP19.21■□□□□ 0.67
FN1-208ENST00000426059 HOXD13P35453 343 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 SPAG1Q07617 926 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 FILIP1LQ4L180 1135 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 ZC2HC1CQ53FD0 456 aaPredicted RBP19.21■□□□□ 0.67
FN1-208ENST00000426059 CEP135Q66GS9 1140 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 ANO5Q75V66 913 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 C4orf19Q8IY42 314 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 DAW1Q8N136 415 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 SENP7Q9BQF6 1050 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 MAGEC2Q9UBF1 373 aaPredicted RBP19.21■□□□□ 0.67
FN1-208ENST00000426059 LRRC37A2A6NM11 1700 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 ARIH2O95376 493 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 ICAM3P32942 547 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 XKR9Q5GH70 373 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 TMEM63BQ5T3F8 832 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 SPECC1LQ69YQ0 1117 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 FBXO16Q8IX29 292 aaPredicted RBP19.21■□□□□ 0.67
FN1-208ENST00000426059 ANKRD20A12PQ8NF67 263 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 KCTD10Q9H3F6 313 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 SLC45A1Q9Y2W3 748 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 LOXHD1Q8IVV2 1947 aa19.21■□□□□ 0.67
FN1-208ENST00000426059 COPB2P35606 906 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 MAPK7Q13164 816 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 ZCWPW2Q504Y3 356 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 ABHD15Q6UXT9 468 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 SMAP1Q8IYB5 467 aaPredicted RBP19.2■□□□□ 0.66
FN1-208ENST00000426059 CCDC43Q96MW1 224 aaKnown RBP19.2■□□□□ 0.66
FN1-208ENST00000426059 PARVGQ9HBI0 331 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 LYPLA2O95372 231 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 PSAPP07602 524 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 RASAL3Q86YV0 1011 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 TUBGCP2Q9BSJ2 902 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 GPRC5CQ9NQ84 441 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 DBR1Q9UK59 544 aaKnown RBP19.2■□□□□ 0.66
FN1-208ENST00000426059 MYH9P35579 1960 aaKnown RBP19.2■□□□□ 0.66
FN1-208ENST00000426059 CENPFP49454 3210 aa19.2■□□□□ 0.66
FN1-208ENST00000426059 EEF1GP26641 437 aaKnown RBP19.19■□□□□ 0.66
FN1-208ENST00000426059 ADORA2AP29274 412 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 ADKP55263 362 aaKnown RBP19.19■□□□□ 0.66
FN1-208ENST00000426059 LRRC63Q05C16 580 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 ODR4Q5SWX8 454 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 LRRC55Q6ZSA7 311 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 EPM2AIP1Q7L775 607 aaPredicted RBP19.19■□□□□ 0.66
FN1-208ENST00000426059 SAPCD2Q86UD0 394 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 SHCBP1Q8NEM2 672 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 CPLX3Q8WVH0 158 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 TSG101Q99816 390 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 PLXNB2O15031 1838 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 B4DLN1 442 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 IGF2BP3O00425 579 aaKnown RBP eCLIP19.19■□□□□ 0.666e-45■□□□□ 9.7
FN1-208ENST00000426059 PBX1P40424 430 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 MTIF2P46199 727 aaKnown RBP19.19■□□□□ 0.66
FN1-208ENST00000426059 GSDMDP57764 484 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 CCNA1P78396 465 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 UBXN1Q04323 297 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.19■□□□□ 0.666e-7■□□□□ 10.7
FN1-208ENST00000426059 NOC3LQ8WTT2 800 aaKnown RBP19.19■□□□□ 0.66
FN1-208ENST00000426059 FIZ1Q96SL8 496 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 PDGFCQ9NRA1 345 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 CPA4Q9UI42 421 aa19.19■□□□□ 0.66
FN1-208ENST00000426059 SFPQP23246 707 aaKnown RBP eCLIP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms