RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 KCNB1Q14721 858 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 SYCP1Q15431 976 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 DEFB115Q30KQ5 88 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 CYFIP1Q7L576 1253 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 HOMEZQ8IX15 550 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 KCTD17Q8N5Z5 321 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 SYT2Q8N9I0 419 aaPredicted RBP16.66■□□□□ 0.26
CALD1-206ENST00000424922 MORC4Q8TE76 937 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 TMX1Q9H3N1 280 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 TELO2Q9Y4R8 837 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 LOC102724159A0A0B4J2E5 919 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 CCP110O43303 1012 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 AOC2O75106 756 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 EYA4O95677 639 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 PWP2Q15269 919 aaKnown RBP16.66■□□□□ 0.26
CALD1-206ENST00000424922 ZNF658Q5TYW1 1059 aaPredicted RBP16.66■□□□□ 0.26
CALD1-206ENST00000424922 ARMCX2Q7L311 632 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 FBXO16Q8IX29 292 aaPredicted RBP16.66■□□□□ 0.26
CALD1-206ENST00000424922 NACC1Q96RE7 527 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 SENP7Q9BQF6 1050 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 CREBZFQ9NS37 354 aa16.66■□□□□ 0.26
CALD1-206ENST00000424922 NPHP3-ACAD11A0A0J9YXS1 232 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 RHOBTB3O94955 611 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 IDEP14735 1019 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
CALD1-206ENST00000424922 CYP11B2P19099 503 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 UBA1P22314 1058 aaKnown RBP16.65■□□□□ 0.26
CALD1-206ENST00000424922 QARSP47897 775 aaKnown RBP16.65■□□□□ 0.26
CALD1-206ENST00000424922 RAD51AP2Q09MP3 1159 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 TBX2Q13207 712 aaPredicted RBP16.65■□□□□ 0.26
CALD1-206ENST00000424922 NOGQ13253 232 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 SPATA1Q5VX52 437 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
CALD1-206ENST00000424922 CAPNS2Q96L46 248 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 MED15Q96RN5 788 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 ZSWIM4Q9H7M6 989 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
CALD1-206ENST00000424922 EXOC1Q9NV70 894 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 INTS13Q9NVM9 706 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 PCDHA10Q9Y5I2 948 aa16.65■□□□□ 0.26
CALD1-206ENST00000424922 SLC15A5A6NIM6 579 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 TGFB3P10600 412 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 APLP1P51693 650 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 ACTR2P61160 394 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 UGCGQ16739 394 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 LY6KQ17RY6 165 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 ARSHQ5FYA8 562 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 E4F1Q66K89 784 aaPredicted RBP16.64■□□□□ 0.25
CALD1-206ENST00000424922 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 UNC13DQ70J99 1090 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 RDM1Q8NG50 284 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 DNAJC19Q96DA6 116 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 PCNTO95613 3336 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 PVALEFA0A1B0GWK0 134 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 CA12O43570 354 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 KRT18P05783 430 aaKnown RBP16.64■□□□□ 0.25
CALD1-206ENST00000424922 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
CALD1-206ENST00000424922 KLHL10Q6JEL2 608 aa16.64■□□□□ 0.25
CALD1-206ENST00000424922 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 PPP1R3GB7ZBB8 358 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 ARIH2O95376 493 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
CALD1-206ENST00000424922 PSMC5P62195 406 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 NEDD9Q14511 834 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 TRMT1LQ7Z2T5 733 aaKnown RBP16.63■□□□□ 0.25
CALD1-206ENST00000424922 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
CALD1-206ENST00000424922 GIMAP8Q8ND71 665 aaPredicted RBP16.63■□□□□ 0.25
CALD1-206ENST00000424922 DDX41Q9UJV9 622 aaKnown RBP16.63■□□□□ 0.25
CALD1-206ENST00000424922 MAPK8IP1Q9UQF2 711 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 FARP2O94887 1054 aaPredicted RBP16.63■□□□□ 0.25
CALD1-206ENST00000424922 PSAPP07602 524 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 NPLOC4Q8TAT6 608 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 HPS3Q969F9 1004 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 MAML3Q96JK9 1138 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 RUSC1Q9BVN2 902 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 PDGFCQ9NRA1 345 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 PANK4Q9NVE7 773 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 GABBR1Q9UBS5 961 aa16.63■□□□□ 0.25
CALD1-206ENST00000424922 DIS3Q9Y2L1 958 aaKnown RBP16.63■□□□□ 0.25
CALD1-206ENST00000424922 GGPS1O95749 300 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 PRCPP42785 496 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 STK4Q13043 487 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 MORN1Q5T089 497 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 SWSAP1Q6NVH7 229 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 MIS18BP1Q6P0N0 1132 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 ABHD15Q6UXT9 468 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 TRMT44Q8IYL2 757 aaKnown RBP16.62■□□□□ 0.25
CALD1-206ENST00000424922 SYNRGQ9UMZ2 1314 aa16.62■□□□□ 0.25
CALD1-206ENST00000424922 A0A1B0GTH6 734 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 ALDH1A1P00352 501 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 GIT2Q14161 759 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 NR1I3Q14994 352 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
CALD1-206ENST00000424922 SPECC1LQ69YQ0 1117 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms