RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 RGL1Q9NZL6 768 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 TRPC6Q9Y210 931 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 VWA3AA6NCI4 1184 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 B4GALT4O60513 344 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 YEATS4O95619 227 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 MUTP22033 750 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 ADAM17P78536 824 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 FAAP100Q0VG06 881 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 PPFIA1Q13136 1202 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 FOXD4L6Q3SYB3 417 aaPredicted RBP23.11■■□□□ 1.29
PMS1-211ENST00000424766 XKR3Q5GH77 459 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 ZNF484Q5JVG2 852 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 FOXD4L3Q6VB84 417 aaPredicted RBP23.11■■□□□ 1.29
PMS1-211ENST00000424766 TRPV6Q9H1D0 765 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 SETD4Q9NVD3 440 aa23.11■■□□□ 1.29
PMS1-211ENST00000424766 STBD1O95210 358 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 LYPLA2O95372 231 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 OATP04181 439 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 RPA1P27694 616 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 LONP1P36776 959 aaKnown RBP23.1■■□□□ 1.29
PMS1-211ENST00000424766 PRKCEQ02156 737 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 DNM1Q05193 864 aaKnown RBP23.1■■□□□ 1.29
PMS1-211ENST00000424766 CTTNQ14247 550 aaKnown RBP23.1■■□□□ 1.29
PMS1-211ENST00000424766 STK38Q15208 465 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 GRIK4Q16099 956 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 PTGISQ16647 500 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 TPH2Q8IWU9 490 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 AK8Q96MA6 479 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 LXNQ9BS40 222 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 NIFKQ9BYG3 293 aaKnown RBP23.1■■□□□ 1.29
PMS1-211ENST00000424766 TRMT13Q9NUP7 481 aaKnown RBP23.1■■□□□ 1.29
PMS1-211ENST00000424766 SRPRBQ9Y5M8 271 aaKnown RBP23.1■■□□□ 1.29
PMS1-211ENST00000424766 COL1A2P08123 1366 aa23.1■■□□□ 1.29
PMS1-211ENST00000424766 CLTBP09497 229 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 SPATA31C1P0DKV0 1188 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 MARCKSP29966 332 aaPredicted RBP23.09■■□□□ 1.29
PMS1-211ENST00000424766 CYP4A11Q02928 519 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 MLLT1Q03111 559 aaPredicted RBP23.09■■□□□ 1.29
PMS1-211ENST00000424766 HIC1Q14526 733 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 HAUS3Q68CZ6 603 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 CATSPER3Q86XQ3 398 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 WRAP73Q9P2S5 460 aaPredicted RBP23.09■■□□□ 1.29
PMS1-211ENST00000424766 FBXO2Q9UK22 296 aaPredicted RBP23.09■■□□□ 1.29
PMS1-211ENST00000424766 NR2E3Q9Y5X4 410 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 EVPLQ92817 2033 aa23.09■■□□□ 1.29
PMS1-211ENST00000424766 DDX11L8A8MPP1 907 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 SPTLC2O15270 562 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 PPP6R2O75170 966 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 XRCC6P12956 609 aaKnown RBP eCLIP23.08■■□□□ 1.29
PMS1-211ENST00000424766 ZNF200P98182 395 aaPredicted RBP23.08■■□□□ 1.29
PMS1-211ENST00000424766 KRT79Q5XKE5 535 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 OTUD6AQ7L8S5 288 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 LMBR1Q8WVP7 490 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 RCOR1Q9UKL0 485 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 NOD1Q9Y239 953 aa23.08■■□□□ 1.29
PMS1-211ENST00000424766 DNAH12Q6ZR08 3092 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 MBLAC1A4D2B0 266 aaPredicted RBP23.07■■□□□ 1.28
PMS1-211ENST00000424766 SLC26A4O43511 780 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 MED24O75448 989 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 CCT6AP40227 531 aaKnown RBP23.07■■□□□ 1.28
PMS1-211ENST00000424766 KRT85P78386 507 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 PTK7Q13308 1070 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 MARCH8Q5T0T0 291 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 TRMT1LQ7Z2T5 733 aaKnown RBP23.07■■□□□ 1.28
PMS1-211ENST00000424766 C7orf61Q8IZ16 206 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 KRI1Q8N9T8 703 aaKnown RBP23.07■■□□□ 1.28
PMS1-211ENST00000424766 CTAGE1Q96RT6 745 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 PDLIM7Q9NR12 457 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 TMEM39AQ9NV64 488 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 CHMP5Q9NZZ3 219 aa23.07■■□□□ 1.28
PMS1-211ENST00000424766 ZBTB42B2RXF5 422 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 KIAA0355O15063 1070 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 TREHO43280 583 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 TARBP2Q15633 366 aaKnown RBP23.06■■□□□ 1.28
PMS1-211ENST00000424766 ANO5Q75V66 913 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 SERINC5Q86VE9 423 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 KCNG4Q8TDN1 519 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 SNX29Q8TEQ0 813 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 NACC1Q96RE7 527 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 MMTAG2Q9BU76 263 aaKnown RBP23.06■■□□□ 1.28
PMS1-211ENST00000424766 ANKEF1Q9NU02 776 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 TBX21Q9UL17 535 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 PPME1Q9Y570 386 aa23.06■■□□□ 1.28
PMS1-211ENST00000424766 PP2D1A8MPX8 630 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 KLRC1P26715 233 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 CDC25AP30304 524 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 YWHABP31946 246 aaKnown RBP23.05■■□□□ 1.28
PMS1-211ENST00000424766 IGBP1P78318 339 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 GRIN1Q05586 938 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 MTHFD1LQ6UB35 978 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 KCTD17Q8N5Z5 321 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 TRAPPC12Q8WVT3 735 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 PRKAG2Q9UGJ0 569 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 SEPT9Q9UHD8 586 aaPredicted RBP23.05■■□□□ 1.28
PMS1-211ENST00000424766 TUBE1Q9UJT0 475 aa23.05■■□□□ 1.28
PMS1-211ENST00000424766 LOXHD1Q8IVV2 1947 aa23.04■■□□□ 1.28
PMS1-211ENST00000424766 MAGEB2O15479 319 aa23.04■■□□□ 1.28
PMS1-211ENST00000424766 CYP2C9P11712 490 aa23.04■■□□□ 1.28
PMS1-211ENST00000424766 UBA7P41226 1012 aa23.04■■□□□ 1.28
PMS1-211ENST00000424766 HYIQ5T013 277 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms