RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 ZNF862O60290 1169 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 IGBP1P78318 339 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 SPIRE1Q08AE8 756 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 PPP2R5CQ13362 524 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 GNL2Q13823 731 aaKnown RBP12.32□□□□□ -0.44
TOP3B-203ENST00000424393 GPNMBQ14956 572 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 TMEM240Q5SV17 173 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 ZNF618Q5T7W0 954 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 LRRC8DQ7L1W4 858 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 RDM1Q8NG50 284 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 TRAPPC12Q8WVT3 735 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 MTMR9Q96QG7 549 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 TMEM60Q9H2L4 133 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
TOP3B-203ENST00000424393 RRN3P2A6NIE6 340 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 ZBTB42B2RXF5 422 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 HBP1O60381 514 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 NEMFO60524 1076 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 BAG4O95429 457 aaKnown RBP12.31□□□□□ -0.44
TOP3B-203ENST00000424393 SELPP16109 830 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 MCM7P33993 719 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-203ENST00000424393 NBR1Q14596 966 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 MBTPS1Q14703 1052 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 ZNF174Q15697 407 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 CALCRLQ16602 461 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 TTC38Q5R3I4 469 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 LARP1BQ659C4 914 aaKnown RBP12.31□□□□□ -0.44
TOP3B-203ENST00000424393 FAM109BQ6ICB4 259 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-203ENST00000424393 ZNF365Q70YC5 407 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 DEFB128Q7Z7B8 93 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 MAFAQ8NHW3 353 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-203ENST00000424393 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-203ENST00000424393 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
TOP3B-203ENST00000424393 GUCD1Q96NT3 240 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
TOP3B-203ENST00000424393 COL1A2P08123 1366 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 H3BQV1 296 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 MARCH6O60337 910 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 NBNO60934 754 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 STBD1O95210 358 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 RFC2P35250 354 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 THPOP40225 353 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 TRAPPC10P48553 1259 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 PRKCEQ02156 737 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 ZNF484Q5JVG2 852 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 MCTP1Q6DN14 999 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 PSRC1Q6PGN9 363 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-203ENST00000424393 TRMT1LQ7Z2T5 733 aaKnown RBP12.3□□□□□ -0.44
TOP3B-203ENST00000424393 CKAP2LQ8IYA6 745 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 TET1Q8NFU7 2136 aa12.3□□□□□ -0.44
TOP3B-203ENST00000424393 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
TOP3B-203ENST00000424393 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
TOP3B-203ENST00000424393 RSPH10B2B2RC85 870 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 CAND2O75155 1236 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 FGBP02675 491 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 OATP04181 439 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 CTSHP09668 335 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 RSPH10BP0C881 870 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 TXKP42681 527 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-203ENST00000424393 EPHA7Q15375 998 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 TAF2Q6P1X5 1199 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 MTHFD1LQ6UB35 978 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 RPAINQ86UA6 219 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 HSCBQ8IWL3 235 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 RPUSD2Q8IZ73 545 aaKnown RBP12.29□□□□□ -0.44
TOP3B-203ENST00000424393 C4orf32Q8N8J7 132 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 BANK1Q8NDB2 785 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 DNAJB3Q8WWF6 145 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 FAM167AQ96KS9 214 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
TOP3B-203ENST00000424393 OSBPL7Q9BZF2 842 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 TTC12Q9H892 705 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-203ENST00000424393 WRAP73Q9P2S5 460 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-203ENST00000424393 PCDHA12Q9UN75 941 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 PCDHA2Q9Y5H9 948 aa12.29□□□□□ -0.44
TOP3B-203ENST00000424393 ARID2Q68CP9 1835 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
TOP3B-203ENST00000424393 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 C22orf31O95567 290 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 CXCL10P02778 98 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
TOP3B-203ENST00000424393 PFKMP08237 780 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 FOSL2P15408 326 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 KLRC1P26715 233 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 PSMC5P62195 406 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 MGAT3Q09327 533 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 TCTN1Q2MV58 587 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 FAM26DQ5JW98 314 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 OTOP2Q7RTS6 562 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
TOP3B-203ENST00000424393 SYMPKQ92797 1274 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms