RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 PCDHA2Q9Y5H9 948 aa2.18□□□□□ -2.06
PMS1-210ENST00000424307 COX11Q9Y6N1 276 aa2.18□□□□□ -2.06
PMS1-210ENST00000424307 ASXL2Q76L83 1435 aa2.18□□□□□ -2.06
PMS1-210ENST00000424307 A0A1W2PQU0 124 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 ZAR1LA6NP61 321 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 MASP2O00187 686 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 KRIT1O00522 736 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 LTFP02788 710 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 SNRPB2P08579 225 aaKnown RBP2.17□□□□□ -2.06
PMS1-210ENST00000424307 POLD1P28340 1107 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 HIBADHP31937 336 aaKnown RBP2.17□□□□□ -2.06
PMS1-210ENST00000424307 NTRK3Q16288 839 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 SLC35F1Q5T1Q4 408 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 STEAP3Q658P3 488 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 KCNT2Q6UVM3 1135 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 CEP68Q76N32 757 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 ZNF627Q7L945 461 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 ADGRG3Q86Y34 549 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.17□□□□□ -2.061e-19■□□□□ 9.5
PMS1-210ENST00000424307 JAM3Q9BX67 310 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 CEP72Q9P209 647 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 REXO2Q9Y3B8 237 aaKnown RBP2.17□□□□□ -2.06
PMS1-210ENST00000424307 TELO2Q9Y4R8 837 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 ARHGAP6O43182 974 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 KLF4O43474 513 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 DGKIO75912 1065 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 SSBP05455 408 aaKnown RBP eCLIP2.17□□□□□ -2.06
PMS1-210ENST00000424307 RBM25P49756 843 aaKnown RBP2.17□□□□□ -2.06
PMS1-210ENST00000424307 DUSP8Q13202 625 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 Q6ZPA2 131 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 SPATC1Q76KD6 591 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 PPIL6Q8IXY8 311 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 TMEM169Q96HH4 297 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 SPATA32Q96LK8 384 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 APBA2Q99767 749 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 IER2Q9BTL4 223 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 ARHGEF4Q9NR80 690 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 PRKAG3Q9UGI9 489 aa2.17□□□□□ -2.06
PMS1-210ENST00000424307 DLX3O60479 287 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 SCG5P05408 212 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 ETV4P43268 484 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 FOXB2Q5VYV0 432 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 ANKS3Q6ZW76 656 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 DIO2Q92813 273 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 HAS1Q92839 578 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 KCND1Q9NSA2 647 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 PUF60Q9UHX1 559 aaKnown RBP2.16□□□□□ -2.06
PMS1-210ENST00000424307 TRAF6Q9Y4K3 522 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 TCRBV5S4A2TA0A5A2 114 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 CPP00450 1065 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 KRT4P19013 534 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 PROZP22891 400 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 KCNJ6P48051 423 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 LSAMPQ13449 338 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 TOP3AQ13472 1001 aaPredicted RBP2.16□□□□□ -2.06
PMS1-210ENST00000424307 LY6G5CQ5SRR4 150 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 FSTL4Q6MZW2 842 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 HDGFL2Q7Z4V5 671 aaPredicted RBP2.16□□□□□ -2.06
PMS1-210ENST00000424307 PROSER1Q86XN7 944 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 SYNE4Q8N205 404 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 CLEC4DQ8WXI8 215 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 LPPQ93052 612 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 RIOX1Q9H6W3 641 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 NR2E1Q9Y466 385 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 NPFFR2Q9Y5X5 522 aa2.16□□□□□ -2.06
PMS1-210ENST00000424307 CCDC85CA6NKD9 419 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 NOP56O00567 594 aaKnown RBP2.15□□□□□ -2.07
PMS1-210ENST00000424307 NKRFO15226 690 aaKnown RBP eCLIP2.15□□□□□ -2.07
PMS1-210ENST00000424307 COL6A2P12110 1019 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 HOXC12P31275 282 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 GRIN1Q05586 938 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 NCAPHQ15003 741 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 DDR2Q16832 855 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 ZNF808Q8N4W9 903 aaPredicted RBP2.15□□□□□ -2.07
PMS1-210ENST00000424307 PIP4K2CQ8TBX8 421 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.15□□□□□ -2.07
PMS1-210ENST00000424307 OSBP2Q969R2 916 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 PLA2G12BQ9BX93 195 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 TLR9Q9NR96 1032 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 PLA2G3Q9NZ20 509 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 ARHGAP20Q9P2F6 1191 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 LRP2BPQ9P2M1 347 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 MYOTQ9UBF9 498 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 STRIP2Q9ULQ0 834 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 SLC27A2O14975 620 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 MEFVO15553 781 aaPredicted RBP2.15□□□□□ -2.07
PMS1-210ENST00000424307 ADCY3O60266 1144 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 DIAPH1O60610 1272 aaKnown RBP2.15□□□□□ -2.07
PMS1-210ENST00000424307 GRM7Q14831 915 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 PTPAQ15257 358 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 TM4SF20Q53R12 229 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 TMC5Q6UXY8 1006 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 SGMS1Q86VZ5 419 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 SH3RF2Q8TEC5 729 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 THAP3Q8WTV1 239 aaPredicted RBP2.15□□□□□ -2.07
PMS1-210ENST00000424307 CHAMP1Q96JM3 812 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 PHF20Q9BVI0 1012 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 TOR3AQ9H497 397 aa2.15□□□□□ -2.07
PMS1-210ENST00000424307 KCNK3O14649 394 aa2.14□□□□□ -2.07
PMS1-210ENST00000424307 CDC14BO60729 498 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms