RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 JMJD4Q9H9V9 463 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 VAT1LQ9HCJ6 419 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 HDAC9Q9UKV0 1011 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 GOLGA6L7A0A1B0GV03 622 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 TRIM37O94972 964 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 RPL13P26373 211 aaKnown RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 EPS15P42566 896 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 HSPA2P54652 639 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 POU5F1Q01860 360 aaKnown RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 EPHA7Q15375 998 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 HERC4Q5GLZ8 1057 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 FBXW10Q5XX13 1052 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 GPBP1Q86WP2 473 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 HES6Q96HZ4 224 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 PACSIN1Q9BY11 444 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 SAP30BPQ9UHR5 308 aaKnown RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 NCANO14594 1321 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 H0YHG0 523 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 CEP104O60308 925 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 PPFIA2O75334 1257 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 PON1P27169 355 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 GBP1P32455 592 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 HLTFQ14527 1009 aaKnown RBP eCLIP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 TCEAL1Q15170 157 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 EXOC3L4Q17RC7 722 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 TTC19Q6DKK2 380 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 COA7Q96BR5 231 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 TLCD1Q96CP7 247 aa16.62■□□□□ 0.25
C9orf3-204ENST00000424143 NAP1L3Q99457 506 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 DHX36Q9H2U1 1008 aaKnown RBP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 NOC2LQ9Y3T9 749 aaKnown RBP16.62■□□□□ 0.25
C9orf3-204ENST00000424143 FAM187AA6NFU0 413 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 TMCO5BA8MYB1 307 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 MYO1FO00160 1098 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 ZBTB5O15062 677 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 TTLL1O95922 423 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 CTNNA1P35221 906 aaKnown RBP16.61■□□□□ 0.25
C9orf3-204ENST00000424143 TNNI2P48788 182 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 MNAT1P51948 309 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 HDLBPQ00341 1268 aaKnown RBP16.61■□□□□ 0.25
C9orf3-204ENST00000424143 AP3B2Q13367 1082 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 GRIK5Q16478 980 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 CCDC121Q6ZUS5 278 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 SYT2Q8N9I0 419 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-204ENST00000424143 SPAG5Q96R06 1193 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 RAB17Q9H0T7 212 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 CD209Q9NNX6 404 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 ANKIB1Q9P2G1 1089 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 KIAA1024Q9UPX6 916 aa16.61■□□□□ 0.25
C9orf3-204ENST00000424143 E7EVH7 732 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 ZPR1O75312 459 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 NUDT17P0C025 328 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 NR2F2P24468 414 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 HADHBP55084 474 aaKnown RBP16.6■□□□□ 0.25
C9orf3-204ENST00000424143 IFFO1Q0D2I5 559 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 SKIDA1Q1XH10 827 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 ARSHQ5FYA8 562 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 PEX26Q7Z412 305 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 TMC3Q7Z5M5 1100 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 NT5DC3Q86UY8 548 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 SLC30A5Q8TAD4 765 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 KDM4CQ9H3R0 1056 aa16.6■□□□□ 0.25
C9orf3-204ENST00000424143 TYW1Q9NV66 732 aaKnown RBP16.6■□□□□ 0.25
C9orf3-204ENST00000424143 KRIT1O00522 736 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 MARCH6O60337 910 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 XRCC5P13010 732 aaKnown RBP16.59■□□□□ 0.25
C9orf3-204ENST00000424143 HSPA6P17066 643 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 LMNB1P20700 586 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 SLC4A8Q2Y0W8 1093 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 BICDL1Q6ZP65 573 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 CRYGNQ8WXF5 182 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 TATDN2Q93075 761 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 VTI1AQ96AJ9 217 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 MKNK1Q9BUB5 465 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 TMEM109Q9BVC6 243 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 FAM129AQ9BZQ8 928 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 PSTPIP2Q9H939 334 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 SIX2Q9NPC8 291 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 KLC4Q9NSK0 619 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
C9orf3-204ENST00000424143 AMFRQ9UKV5 643 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 MTMR7Q9Y216 660 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 E9PMD0 336 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 CCDC172P0C7W6 258 aa16.59■□□□□ 0.25
C9orf3-204ENST00000424143 GAP43P17677 238 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms