RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ERCC5P28715 1186 aaPredicted RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 ACVRL1P37023 503 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 TDO2P48775 406 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 PPP2R2AP63151 447 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 TMC5Q6UXY8 1006 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 AMOTL1Q8IY63 956 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 ZNF669Q96BR6 464 aaPredicted RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 C8orf37Q96NL8 207 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.53□□□□□ -1.841e-19■□□□□ 9.5
PMS1-209ENST00000424059 PHF20Q9BVI0 1012 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 MEGF9Q9H1U4 602 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 VPS11Q9H270 941 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 GNL3LQ9NVN8 582 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 SYNPO2Q9UMS6 1093 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 R3HCC1Q9Y3T6 440 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 U2SURPO15042 1029 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 CUTAO60888 179 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 ZNF623O75123 536 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 KLHL18O94889 574 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 FBXO21O94952 628 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 GJB6O95452 261 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 KNG1P01042 644 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 FSHBP01225 129 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 ENO2P09104 434 aaPredicted RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 FAM200BP0CF97 657 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 GRK2P25098 689 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 COPB2P35606 906 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 GRK3P35626 688 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 EPHA5P54756 1037 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 GPR85P60893 370 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 PURAQ00577 322 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 ARID5AQ03989 594 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 NEXNQ0ZGT2 675 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 SF1Q15637 639 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 ZRSR2Q15696 482 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 PAN2Q504Q3 1202 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 LBX2Q6XYB7 198 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 ZCRB1Q8TBF4 217 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 PIP4K2CQ8TBX8 421 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 SENP7Q9BQF6 1050 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 AARSD1Q9BTE6 412 aaKnown RBP3.53□□□□□ -1.84
PMS1-209ENST00000424059 STK26Q9P289 416 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 NRBP1Q9UHY1 535 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 SMC3Q9UQE7 1217 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 MRVI1Q9Y6F6 885 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 COMMD10Q9Y6G5 202 aa3.53□□□□□ -1.84
PMS1-209ENST00000424059 DLX3O60479 287 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 CNOT4O95628 575 aaKnown RBP3.52□□□□□ -1.85
PMS1-209ENST00000424059 CSF2RBP32927 897 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 ETFBP38117 255 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 HMGA2P52926 109 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 TUSC3Q13454 348 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 R3HDM1Q15032 1099 aaKnown RBP3.52□□□□□ -1.85
PMS1-209ENST00000424059 ZNF568Q3ZCX4 644 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 SPRED1Q7Z699 444 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 C11orf96Q7Z7L8 435 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 ST13P5Q8NFI4 369 aaPredicted RBP3.52□□□□□ -1.85
PMS1-209ENST00000424059 NUDT10Q8NFP7 164 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 UBXN4Q92575 508 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 ITFG2Q969R8 447 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 NUDT11Q96G61 164 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 IER2Q9BTL4 223 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 ZNF747Q9BV97 191 aa3.52□□□□□ -1.85
PMS1-209ENST00000424059 ZNF839A8K0R7 811 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 H0Y858 1186 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 SLC27A2O14975 620 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 IPO8O15397 1037 aaKnown RBP3.51□□□□□ -1.85
PMS1-209ENST00000424059 GNAT1P11488 350 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 C1QTNF12Q5T7M4 302 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 DPP8Q6V1X1 898 aaPredicted RBP3.51□□□□□ -1.85
PMS1-209ENST00000424059 IFNL3Q8IZI9 196 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 SLC43A3Q8NBI5 491 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 KCND1Q9NSA2 647 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 RBM28Q9NW13 759 aaKnown RBP3.51□□□□□ -1.85
PMS1-209ENST00000424059 WASF3Q9UPY6 502 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 SYNRGQ9UMZ2 1314 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 FAM47E-STBD1D6RA91 191 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 B4GALT4O60513 344 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 COQ9O75208 318 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 CT47B1P0C2W7 299 aaPredicted RBP3.51□□□□□ -1.85
PMS1-209ENST00000424059 DMTNQ08495 405 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 USP10Q14694 798 aaKnown RBP3.51□□□□□ -1.85
PMS1-209ENST00000424059 DDR2Q16832 855 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 SKIDA1Q1XH10 827 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 DNTTIP2Q5QJE6 756 aaKnown RBP3.51□□□□□ -1.85
PMS1-209ENST00000424059 STYK1Q6J9G0 422 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 USP53Q70EK8 1073 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 Q8N1X5 172 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 Q8TCH9 128 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 KATNBL1Q9H079 304 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 ZNF408Q9H9D4 720 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 ARHGAP20Q9P2F6 1191 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 ZFP69BQ9UJL9 534 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 FBXO9Q9UK97 447 aaPredicted RBP3.51□□□□□ -1.85
PMS1-209ENST00000424059 ZDHHC9Q9Y397 364 aa3.51□□□□□ -1.85
PMS1-209ENST00000424059 KIF20AO95235 890 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 NAT1P18440 290 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 LMOD3Q0VAK6 560 aa3.5□□□□□ -1.85
PMS1-209ENST00000424059 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.5□□□□□ -1.85
PMS1-209ENST00000424059 LRRC47Q8N1G4 583 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms