RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 FAM160A2Q8N612 972 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 RNF139Q8WU17 664 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SCFD2Q8WU76 684 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 LPAR1Q92633 364 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 TACO1Q9BSH4 297 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 IL23AQ9NPF7 189 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CLIP2Q9UDT6 1046 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DISP2A7MBM2 1401 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ARHGAP23Q9P227 1491 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 MYH13Q9UKX3 1938 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 IKBKBO14920 756 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DGKEP52429 567 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 KCNC4Q03721 635 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DEUP1Q05D60 604 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 MTMR2Q13614 643 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 GSE1Q14687 1217 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 FKBP15Q5T1M5 1219 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PKN3Q6P5Z2 889 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 LINC00116Q8NCU8 138 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 APPL2Q8NEU8 664 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CYP2W1Q8TAV3 490 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 NSUN6Q8TEA1 469 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PRCCQ92733 491 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CDCA3Q99618 268 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 FANCEQ9HB96 536 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 FAM8A1Q9UBU6 413 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 FLT1P17948 1338 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 TLR2O60603 784 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 FAM13AO94988 1023 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 TNNC2P02585 160 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ALDH2P05091 517 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PPP2R1AP30153 589 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 IRS1P35568 1242 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ACTN2P35609 894 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 OR1G1P47890 313 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SMAD3P84022 425 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DSG2Q14126 1118 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ATL3Q6DD88 541 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DUS1LQ6P1R4 473 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 TMEM179Q6ZVK1 233 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SCUBE3Q8IX30 993 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ADSSL1Q8N142 457 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 FAM151AQ8WW52 585 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SMG7Q92540 1137 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DNAJC7Q99615 494 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 NFKBIZQ9BYH8 718 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 UNC93B1Q9H1C4 597 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SENP2Q9HC62 589 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 AATFQ9NY61 560 aaKnown RBP eCLIP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CCDC88AQ3V6T2 1871 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 VSTM5A8MXK1 200 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 H0Y626 953 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 DNM1LO00429 736 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 C2CD2LO14523 706 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PFDN6O15212 129 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SMARCA5O60264 1052 aaPredicted RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 TRIM16O95361 564 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 CKBP12277 381 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 MYL4P12829 197 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 RPL17P18621 184 aaKnown RBP3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ABCD1P33897 745 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 PLPP4Q5VZY2 271 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 KSR2Q6VAB6 950 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 MIER3Q7Z3K6 550 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 GPATCH11Q8N954 259 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 USP33Q8TEY7 942 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 RUBCNQ92622 972 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 TEX13BQ9BXU2 312 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 SLC38A10Q9HBR0 1119 aa3.91□□□□□ -1.78
TOP2A-201ENST00000423485 ABHD14A-ACY1A0A1B0GW23 586 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 CXCL14O95715 111 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 RALAP11233 206 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 NEFHP12036 1026 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 CTSEP14091 401 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 HNRNPH1P31943 449 aaKnown RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 PRKCZQ05513 592 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 GCKRQ14397 625 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 ACCSLQ4AC99 568 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 HEATR3Q7Z4Q2 680 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 FBXO11Q86XK2 927 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 OTUD7AQ8TE49 926 aaPredicted RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 SMARCE1Q969G3 411 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 TRERF1Q96PN7 1200 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 INCENPQ9NQS7 918 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 ANKRD36CQ5JPF3 1778 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 DAPK3O43293 454 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 SORBS3O60504 671 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 ENTPD3O75355 529 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 ALDH1L1O75891 902 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 BAIAP3O94812 1187 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 GLUD1P00367 558 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 JMJD7P0C870 316 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 CYP19A1P11511 503 aaPredicted RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 ITGAXP20702 1163 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 DNAJB2P25686 324 aa3.9□□□□□ -1.78
TOP2A-201ENST00000423485 CCT6AP40227 531 aaKnown RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 MAGEA10P43363 369 aaPredicted RBP3.9□□□□□ -1.78
TOP2A-201ENST00000423485 PHKA2P46019 1235 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms