RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 EDRF1Q3B7T1 1238 aa17.36■□□□□ 0.37
TRIM13-204ENST00000420995 GJB7Q6PEY0 223 aa17.36■□□□□ 0.37
TRIM13-204ENST00000420995 C1orf131Q8NDD1 294 aaKnown RBP17.36■□□□□ 0.37
TRIM13-204ENST00000420995 TPCN2Q8NHX9 752 aa17.36■□□□□ 0.37
TRIM13-204ENST00000420995 ACTRT1Q8TDG2 376 aa17.36■□□□□ 0.37
TRIM13-204ENST00000420995 BCCIPQ9P287 314 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM13-204ENST00000420995 FBXL5Q9UKA1 691 aa17.36■□□□□ 0.37
TRIM13-204ENST00000420995 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
TRIM13-204ENST00000420995 KRIT1O00522 736 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 CES2O00748 559 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 BACH1O14867 736 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 DAPK3O43293 454 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 FSBPO95073 299 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 TMOD1P28289 359 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 HOXD13P35453 343 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 GABPAQ06546 454 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 VPS72Q15906 364 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 TCERG1LQ5VWI1 586 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 SPATS2Q86XZ4 545 aaKnown RBP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 UBLCP1Q8WVY7 318 aaPredicted RBP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 PBKQ96KB5 322 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 BCAS3Q9H6U6 928 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 RTCBQ9Y3I0 505 aaKnown RBP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 IGKV6D-41A0A0C4DH26 115 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 FRMD3A2A2Y4 597 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 ZBTB5O15062 677 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 AKAP3O75969 853 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 TTLL1O95922 423 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 AFPP02771 609 aaKnown RBP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 GCFC2P16383 781 aaKnown RBP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 MICALCLQ6ZW33 695 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.35■□□□□ 0.378e-10■■■□□ 19.2
TRIM13-204ENST00000420995 PAGR1Q9BTK6 254 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 DHX36Q9H2U1 1008 aaKnown RBP17.35■□□□□ 0.37
TRIM13-204ENST00000420995 DAGLAQ9Y4D2 1042 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
TRIM13-204ENST00000420995 RAD21O60216 631 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 LRIG3Q6UXM1 1119 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 PEX26Q7Z412 305 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 SFR1Q86XK3 245 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 CYFIP2Q96F07 1278 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 CELF4Q9BZC1 486 aaKnown RBP17.34■□□□□ 0.37
TRIM13-204ENST00000420995 LRRC4CQ9HCJ2 640 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 DDX4Q9NQI0 724 aaKnown RBP17.34■□□□□ 0.37
TRIM13-204ENST00000420995 SLC12A6Q9UHW9 1150 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 GAKO14976 1311 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 DCDC2CA8MYV0 355 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
TRIM13-204ENST00000420995 XRCC5P13010 732 aaKnown RBP17.34■□□□□ 0.37
TRIM13-204ENST00000420995 IL1R1P14778 569 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 C10orf76Q5T2E6 689 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 LRRC45Q96CN5 670 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 REEP2Q9BRK0 252 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 KCNMB3Q9NPA1 279 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
TRIM13-204ENST00000420995 TTI1O43156 1089 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 FLOT1O75955 427 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 CASP4P49662 377 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 CATSPER3Q86XQ3 398 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRIM13-204ENST00000420995 CEP89Q96ST8 783 aa17.34■□□□□ 0.37
TRIM13-204ENST00000420995 MYH4Q9Y623 1939 aa17.33■□□□□ 0.37
TRIM13-204ENST00000420995 IRX3P78415 501 aaPredicted RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 GIT2Q14161 759 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 IFI16Q16666 785 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 KNOP1Q1ED39 458 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 SWT1Q5T5J6 900 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 RC3H1Q5TC82 1133 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 C15orf52Q6ZUT6 534 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 FRMD5Q7Z6J6 570 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 YTHDF3Q7Z739 585 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 DAAM2Q86T65 1068 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 CALR3Q96L12 384 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 RSPH10B2B2RC85 870 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 MPHOSPH10O00566 681 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 RSPH10BP0C881 870 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 EPHA7Q15375 998 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 QPCTQ16769 361 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 EIF1ADQ8N9N8 165 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 CABS1Q96KC9 395 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 DPH5Q9H2P9 285 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 SIX2Q9NPC8 291 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 GCNT4Q9P109 453 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 CNOT8Q9UFF9 292 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 GGA1Q9UJY5 639 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 TRAF3IP3Q9Y228 551 aa17.33■□□□□ 0.36
TRIM13-204ENST00000420995 BZW2Q9Y6E2 419 aaKnown RBP17.33■□□□□ 0.36
TRIM13-204ENST00000420995 DDX3XO00571 662 aaKnown RBP eCLIP17.32■□□□□ 0.367e-7■■□□□ 13.9
TRIM13-204ENST00000420995 KCNA1Q09470 495 aa17.32■□□□□ 0.36
TRIM13-204ENST00000420995 ODF2Q5BJF6 829 aa17.32■□□□□ 0.36
TRIM13-204ENST00000420995 CCDC13Q8IYE1 715 aa17.32■□□□□ 0.36
TRIM13-204ENST00000420995 ARFGAP2Q8N6H7 521 aa17.32■□□□□ 0.36
TRIM13-204ENST00000420995 ANO3Q9BYT9 981 aa17.32■□□□□ 0.36
TRIM13-204ENST00000420995 TRIM31Q9BZY9 425 aa17.32■□□□□ 0.36
TRIM13-204ENST00000420995 IKZF4Q9H2S9 585 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms