RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 C4orf19Q8IY42 314 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 C17orf53Q8N3J3 647 aaPredicted RBP23.24■■□□□ 1.31
GPC1-202ENST00000420138 KCTD10Q9H3F6 313 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 ZHX3Q9H4I2 956 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 NKRFO15226 690 aaKnown RBP eCLIP23.23■■□□□ 1.31
GPC1-202ENST00000420138 PGK2P07205 417 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 ZNF131P52739 623 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 SPECC1LQ69YQ0 1117 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 LRRC55Q6ZSA7 311 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 SHCBP1Q8NEM2 672 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 PORCNQ9H237 461 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 MROH8Q9H579 483 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 COL4A3BPQ9Y5P4 624 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 TLL2Q9Y6L7 1015 aa23.23■■□□□ 1.31
GPC1-202ENST00000420138 GUCY2CP25092 1073 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 RARRES1P49788 294 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 PSMC5P62195 406 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 CCZ1BP86790 482 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 CCZ1P86791 482 aaPredicted RBP23.22■■□□□ 1.31
GPC1-202ENST00000420138 GTF3C2Q8WUA4 911 aaPredicted RBP23.22■■□□□ 1.31
GPC1-202ENST00000420138 FIZ1Q96SL8 496 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 PTPN18Q99952 460 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 VPS16Q9H269 839 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 JPH1Q9HDC5 661 aaPredicted RBP23.22■■□□□ 1.31
GPC1-202ENST00000420138 OLFML3Q9NRN5 406 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 ABT1Q9ULW3 272 aaKnown RBP23.22■■□□□ 1.31
GPC1-202ENST00000420138 R3HCC1Q9Y3T6 440 aaKnown RBP23.22■■□□□ 1.31
GPC1-202ENST00000420138 PCDHA10Q9Y5I2 948 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 SFI1A8K8P3 1242 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 HOXD13P35453 343 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 MAPK7Q13164 816 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 SMAP1Q8IYB5 467 aaPredicted RBP23.22■■□□□ 1.31
GPC1-202ENST00000420138 DAW1Q8N136 415 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 EFCC1Q9HA90 598 aa23.22■■□□□ 1.31
GPC1-202ENST00000420138 ARHGEF35A5YM69 484 aa23.21■■□□□ 1.31
GPC1-202ENST00000420138 TBCAO75347 108 aaKnown RBP23.21■■□□□ 1.31
GPC1-202ENST00000420138 YWHABP31946 246 aaKnown RBP23.21■■□□□ 1.31
GPC1-202ENST00000420138 FILIP1LQ4L180 1135 aa23.21■■□□□ 1.31
GPC1-202ENST00000420138 CNOT6LQ96LI5 555 aaKnown RBP23.21■■□□□ 1.31
GPC1-202ENST00000420138 MMP19Q99542 508 aa23.21■■□□□ 1.31
GPC1-202ENST00000420138 SLC9A2Q9UBY0 812 aa23.21■■□□□ 1.31
GPC1-202ENST00000420138 ODF2LQ9ULJ1 636 aa23.21■■□□□ 1.31
GPC1-202ENST00000420138 TMEM150BA6NC51 233 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 N4BP3O15049 544 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 STBD1O95210 358 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 MYBP10242 640 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 GAP43P17677 238 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 KCTD2Q14681 263 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 DNTTIP2Q5QJE6 756 aaKnown RBP23.2■■□□□ 1.3
GPC1-202ENST00000420138 PADI6Q6TGC4 694 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 ABHD15Q6UXT9 468 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 NELFCDQ8IXH7 590 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 CCDC150Q8NCX0 1101 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 GPRC5AQ8NFJ5 357 aa23.2■■□□□ 1.3
GPC1-202ENST00000420138 MANSC4A6NHS7 340 aaPredicted RBP23.19■■□□□ 1.3
GPC1-202ENST00000420138 TMEM88BA6NKF7 163 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 ZNF862O60290 1169 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 ACTR2P61160 394 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 BMT2Q1RMZ1 405 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 SEPT14Q6ZU15 432 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 ANKRD20A12PQ8NF67 263 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 ZNF507Q8TCN5 953 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 TCEAL9Q9UHQ7 104 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 ZNFX1Q9P2E3 1918 aaKnown RBP23.19■■□□□ 1.3
GPC1-202ENST00000420138 FAM13AO94988 1023 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 SLC10A3P09131 477 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 CREBRFQ8IUR6 639 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 ZC3H3Q8IXZ2 948 aaKnown RBP23.19■■□□□ 1.3
GPC1-202ENST00000420138 ANKRD13CQ8N6S4 541 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 PARVGQ9HBI0 331 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 MORF4L1Q9UBU8 362 aa23.19■■□□□ 1.3
GPC1-202ENST00000420138 LGALS16A8MUM7 142 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 SORBS3O60504 671 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 TPM2P07951 284 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 GOLGA8FQ08AF8 430 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 GOLGA8DPQ0D2H9 430 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 CEP135Q66GS9 1140 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 ANO5Q75V66 913 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 CCDC60Q8IWA6 550 aaPredicted RBP23.18■■□□□ 1.3
GPC1-202ENST00000420138 FAM114A1Q8IWE2 563 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 MORC4Q8TE76 937 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 PARK7Q99497 189 aaKnown RBP23.18■■□□□ 1.3
GPC1-202ENST00000420138 SH2D3AQ9BRG2 576 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 TUBGCP2Q9BSJ2 902 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 ANKEF1Q9NU02 776 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 MAGEC2Q9UBF1 373 aaPredicted RBP23.18■■□□□ 1.3
GPC1-202ENST00000420138 GABBR1Q9UBS5 961 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 LRRC37A2A6NM11 1700 aa23.18■■□□□ 1.3
GPC1-202ENST00000420138 BACH1O14867 736 aa23.17■■□□□ 1.3
GPC1-202ENST00000420138 HIP1RO75146 1068 aa23.17■■□□□ 1.3
GPC1-202ENST00000420138 KIF20AO95235 890 aa23.17■■□□□ 1.3
GPC1-202ENST00000420138 ATG7O95352 703 aa23.17■■□□□ 1.3
GPC1-202ENST00000420138 UBA1P22314 1058 aaKnown RBP23.17■■□□□ 1.3
GPC1-202ENST00000420138 SFPQP23246 707 aaKnown RBP eCLIP23.17■■□□□ 1.3
GPC1-202ENST00000420138 GCLCP48506 637 aaPredicted RBP23.17■■□□□ 1.3
GPC1-202ENST00000420138 MIIPQ5JXC2 388 aa23.17■■□□□ 1.3
GPC1-202ENST00000420138 UTP14CQ5TAP6 766 aaKnown RBP23.17■■□□□ 1.3
GPC1-202ENST00000420138 CYFIP1Q7L576 1253 aa23.17■■□□□ 1.3
GPC1-202ENST00000420138 MYCT1Q8N699 235 aa23.17■■□□□ 1.3
GPC1-202ENST00000420138 TSG101Q99816 390 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms