RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 FTHL17Q9BXU8 183 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 BARX2Q9UMQ3 279 aaPredicted RBP11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 SQORQ9Y6N5 450 aa11.75□□□□□ -0.53
TNFAIP3-202ENST00000420009 BAZ2BQ9UIF8 2168 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 IFIT3O14879 490 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 ITGB5P18084 799 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 SIGLEC14Q08ET2 396 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 PAN2Q504Q3 1202 aaKnown RBP11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 USP17L6PQ6QN14 398 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 SEPT1Q8WYJ6 367 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 SUSD6Q92537 303 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 ASIC4Q96FT7 647 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 CDHR1Q96JP9 859 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 PHF7Q9BWX1 381 aaPredicted RBP11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 SPZ1Q9BXG8 430 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 PCDHGC5Q9Y5F6 944 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 IGSF9BQ9UPX0 1349 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 DMDP11532 3685 aa11.74□□□□□ -0.53
TNFAIP3-202ENST00000420009 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 CYP21A2P08686 494 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 STAG3L1P0CL83 205 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 SCG2P13521 617 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 ATF7P17544 494 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 VCPP55072 806 aaKnown RBP11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 NUCB1Q02818 461 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 TRDNQ13061 729 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 WTAPQ15007 396 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 IER5Q5VY09 327 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 B4GALNT3Q6L9W6 998 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 VN1R2Q8NFZ6 395 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 GLG1Q92896 1179 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 CUL5Q93034 780 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 FAM49AQ9H0Q0 323 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 SMARCAD1Q9H4L7 1026 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 PADI3Q9ULW8 664 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 TRPV2Q9Y5S1 764 aa11.73□□□□□ -0.53
TNFAIP3-202ENST00000420009 PLXNA4Q9HCM2 1894 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 KDM3AQ9Y4C1 1321 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 ERICH2A1L162 156 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 RRN3P2A6NIE6 340 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 INSRRP14616 1297 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 GATMP50440 423 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 IGBP1P78318 339 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 UBE3AQ05086 875 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 PAK2Q13177 524 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 PCYT2Q99447 389 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 MAP3K14Q99558 947 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 TMX1Q9H3N1 280 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 UBIAD1Q9Y5Z9 338 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 KAT6AQ92794 2004 aa11.72□□□□□ -0.53
TNFAIP3-202ENST00000420009 FSD2A1L4K1 749 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 GFRA3O60609 400 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 SMARCA1P28370 1054 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 ANTXR2P58335 489 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 RBM10P98175 930 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 MTMR1Q13613 665 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 KCNC3Q14003 757 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 SART3Q15020 963 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 PTPN21Q16825 1174 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 DUSP6Q16828 381 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 CATIPQ7Z7H3 387 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 RRP36Q96EU6 259 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 RPGRIP1Q96KN7 1286 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 CDCA3Q99618 268 aaPredicted RBP11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 CELF4Q9BZC1 486 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 TLE6Q9H808 572 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 TLR9Q9NR96 1032 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 FAM86C1Q9NVL1 165 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 PCDHA2Q9Y5H9 948 aa11.71□□□□□ -0.53
TNFAIP3-202ENST00000420009 M0QZ92 97 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 PER2O15055 1255 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 MGEA5O60502 916 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 DDAH1O94760 285 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 SARSP49591 514 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 AAMPQ13685 434 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 FAM43BQ6ZT52 329 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 RALYLQ86SE5 291 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 IGDCC4Q8TDY8 1250 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 TRAPPC12Q8WVT3 735 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 JPH1Q9HDC5 661 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 JADE2Q9NQC1 790 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 PKD2L1Q9P0L9 805 aa11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-202ENST00000420009 SMIM35A0A1B0GVV1 85 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 E7EWF7 191 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 FSCN2O14926 492 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 MAFGO15525 162 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 FGF18O76093 207 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 AVPR2P30518 371 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 KIF5BP33176 963 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 ERVFC1P60507 584 aa11.69□□□□□ -0.54
TNFAIP3-202ENST00000420009 KRT76Q01546 638 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms