RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 HAUS3Q68CZ6 603 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 PPP4R3AQ6IN85 833 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 C8orf74Q6P047 294 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 KCNV1Q6PIU1 500 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 CCDC84Q86UT8 332 aaPredicted RBP7.73□□□□□ -1.17
TVP23C-202ENST00000419890 SMYD4Q8IYR2 804 aaPredicted RBP7.73□□□□□ -1.17
TVP23C-202ENST00000419890 SYNE4Q8N205 404 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 OTUD6BQ8N6M0 293 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 MAGEB6Q8N7X4 407 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 SYN2Q92777 582 aaPredicted RBP7.73□□□□□ -1.17
TVP23C-202ENST00000419890 KAT2BQ92831 832 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
TVP23C-202ENST00000419890 P2RX5Q93086 422 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 DRC1Q96MC2 740 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 NLRP3Q96P20 1036 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 OSBPL9Q96SU4 736 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
TVP23C-202ENST00000419890 TUBGCP2Q9BSJ2 902 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 VCPKMTQ9H867 229 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 TACC3Q9Y6A5 838 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 SLC4A4Q9Y6R1 1079 aa7.73□□□□□ -1.17
TVP23C-202ENST00000419890 BRCA1P38398 1863 aaKnown RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 BTNL10A8MVZ5 291 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 UBE2Q2LH0YL09 131 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 PDE2AO00408 941 aaPredicted RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 FAM107AO95990 144 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 CCDC172P0C7W6 258 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 SCG2P13521 617 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 ANXA13P27216 316 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 CDC25AP30304 524 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 HSPA9P38646 679 aaKnown RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 LIG3P49916 1009 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 GNAQP50148 359 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 NAP1L1P55209 391 aaKnown RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 AMPD3Q01432 767 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 LMNB2Q03252 620 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 C2orf54Q08AI8 447 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 TBC1D8BQ0IIM8 1120 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 BIRC3Q13489 604 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 NEDD9Q14511 834 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 CFAP221Q4G0U5 840 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 TTMPQ5BVD1 217 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 SLC10A5Q5PT55 438 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 IFIT1BQ5T764 474 aaKnown RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 CCDC181Q5TID7 509 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 C9orf131Q5VYM1 1079 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 PPP2R2DQ66LE6 453 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 CNNM4Q6P4Q7 775 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 IQCKQ8N0W5 287 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 C4orf32Q8N8J7 132 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 ENAHQ8N8S7 591 aaPredicted RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 ZNF526Q8TF50 670 aaPredicted RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 NUP133Q8WUM0 1156 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 SHISA4Q96DD7 197 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 RBM17Q96I25 401 aaKnown RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 CCDC42Q96M95 316 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 C7orf25Q9BPX7 421 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 IFIH1Q9BYX4 1025 aaKnown RBP7.72□□□□□ -1.17
TVP23C-202ENST00000419890 CXorf56Q9H5V9 222 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 ARMT1Q9H993 441 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 JADE2Q9NQC1 790 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 DONSONQ9NYP3 566 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 RNF181Q9P0P0 153 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 VPS54Q9P1Q0 977 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 HDAC6Q9UBN7 1215 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 TRIM10Q9UDY6 481 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 ZNF804BA4D1E1 1349 aa7.72□□□□□ -1.17
TVP23C-202ENST00000419890 ARFGEF1Q9Y6D6 1849 aa7.71□□□□□ -1.17
TVP23C-202ENST00000419890 C5orf60A6NFR6 353 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 IRS4O14654 1257 aaPredicted RBP7.71□□□□□ -1.18
TVP23C-202ENST00000419890 ENC1O14682 589 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 TFRCP02786 760 aaKnown RBP7.71□□□□□ -1.18
TVP23C-202ENST00000419890 NR1D1P20393 614 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 LSP1P33241 339 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 MNAT1P51948 309 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 KIF11P52732 1056 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 TNNC1P63316 161 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 LRRC63Q05C16 580 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 ACTN3Q08043 901 aaPredicted RBP7.71□□□□□ -1.18
TVP23C-202ENST00000419890 MTMR3Q13615 1198 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 CUL1Q13616 776 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 RASGRF1Q13972 1273 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 MAN2A1Q16706 1144 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 PREPLQ4J6C6 727 aaPredicted RBP7.71□□□□□ -1.18
TVP23C-202ENST00000419890 EARS2Q5JPH6 523 aaKnown RBP7.71□□□□□ -1.18
TVP23C-202ENST00000419890 MIIPQ5JXC2 388 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 CFAP58Q5T655 872 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 WLSQ5T9L3 541 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 AGBL2Q5U5Z8 902 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 NAA35Q5VZE5 725 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 C6orf89Q6UWU4 347 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 DTHD1Q6ZMT9 781 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 LCORLQ8N3X6 602 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 CSGALNACT2Q8N6G5 542 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 RIN2Q8WYP3 895 aaPredicted RBP7.71□□□□□ -1.18
TVP23C-202ENST00000419890 FAM89AQ96GI7 184 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 CAPZA3Q96KX2 299 aa7.71□□□□□ -1.18
TVP23C-202ENST00000419890 CALR3Q96L12 384 aaKnown RBP7.71□□□□□ -1.18
TVP23C-202ENST00000419890 ATP6V1G3Q96LB4 118 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms