RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 COL13A1Q5TAT6 717 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-208ENST00000419606 RRAGBQ5VZM2 374 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 FAM160B1Q5W0V3 765 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 HAUS3Q68CZ6 603 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 PLA2G4FQ68DD2 849 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 PLPPR4Q7Z2D5 763 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 FMR1NBQ8N0W7 255 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-208ENST00000419606 RASSF8Q8NHQ8 419 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 NEK9Q8TD19 979 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 DHX58Q96C10 678 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 CALML4Q96GE6 196 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 CDK5RAP3Q96JB5 506 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 SMARCAD1Q9H4L7 1026 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 ZSWIM4Q9H7M6 989 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 BLOC1S4Q9NUP1 217 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 ARID2Q68CP9 1835 aa14.35□□□□□ -0.11
ATG4B-208ENST00000419606 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 H3BRB1 525 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 ACTN4O43707 911 aaKnown RBP14.34□□□□□ -0.11
ATG4B-208ENST00000419606 ZNF202O95125 648 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 LYPLA2O95372 231 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 SYKP43405 635 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 PSEN2P49810 448 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 NPEPPSP55786 919 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 DHX8Q14562 1220 aaKnown RBP14.34□□□□□ -0.11
ATG4B-208ENST00000419606 MCM6Q14566 821 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 ANO5Q75V66 913 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 RNF180Q86T96 592 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 C4orf19Q8IY42 314 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 CKAP2LQ8IYA6 745 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 U2AF1L4Q8WU68 220 aaKnown RBP14.34□□□□□ -0.11
ATG4B-208ENST00000419606 STAMQ92783 540 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 ATP6V0A1Q93050 837 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 ZBTB10Q96DT7 871 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 TUT1Q9H6E5 874 aaKnown RBP14.34□□□□□ -0.11
ATG4B-208ENST00000419606 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 OGDHLQ9ULD0 1010 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 STK24Q9Y6E0 443 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
ATG4B-208ENST00000419606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-208ENST00000419606 HAS3O00219 553 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 SGPL1O95470 568 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 F2P00734 622 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 TFRCP02786 760 aaKnown RBP14.33□□□□□ -0.12
ATG4B-208ENST00000419606 OATP04181 439 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 GJB1P08034 283 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 YWHABP31946 246 aaKnown RBP14.33□□□□□ -0.12
ATG4B-208ENST00000419606 STAT6P42226 847 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-208ENST00000419606 ACLYP53396 1101 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 FAM160A1Q05DH4 1040 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 HIC1Q14526 733 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 BRDTQ58F21 947 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-208ENST00000419606 CCDC73Q6ZRK6 1079 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 GRAMD1CQ8IYS0 662 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 TRAPPC12Q8WVT3 735 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 RAD54LQ92698 747 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 NACC1Q96RE7 527 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 MTRQ99707 1265 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 CRISPLD2Q9H0B8 497 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 NT5C3AQ9H0P0 336 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 DACT1Q9NYF0 836 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 ERAP1Q9NZ08 941 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 SEPT9Q9UHD8 586 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-208ENST00000419606 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
ATG4B-208ENST00000419606 ZBTB42B2RXF5 422 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 SLC26A4O43511 780 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 EYA4O95677 639 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 SSBP05455 408 aaKnown RBP eCLIP14.32□□□□□ -0.12
ATG4B-208ENST00000419606 PLA2G4BP0C869 781 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 MUTP22033 750 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 CASP1P29466 404 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 MFSD10Q14728 455 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 KIAA0753Q2KHM9 967 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 XKR3Q5GH77 459 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 ARRDC4Q8NCT1 418 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 ATP8B4Q8TF62 1192 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 MTG1Q9BT17 334 aaPredicted RBP14.32□□□□□ -0.12
ATG4B-208ENST00000419606 BHMT2Q9H2M3 363 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 POLD4Q9HCU8 107 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 BMP2KQ9NSY1 1161 aaPredicted RBP14.32□□□□□ -0.12
ATG4B-208ENST00000419606 DNM3Q9UQ16 869 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 TRPC6Q9Y210 931 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 SCN10AQ9Y5Y9 1956 aa14.32□□□□□ -0.12
ATG4B-208ENST00000419606 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 RBAK-RBAKDNI3L0D1 243 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 ZEB2O60315 1214 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 INSRRP14616 1297 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 AFMP43652 599 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 GJA8P48165 433 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 RARRES1P49788 294 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 SLC12A3P55017 1021 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 ZNF200P98182 395 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-208ENST00000419606 NBPF20Q3BBV1 942 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 MTERF2Q49AM1 385 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 ARSHQ5FYA8 562 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 XKR9Q5GH70 373 aa14.31□□□□□ -0.12
ATG4B-208ENST00000419606 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms