RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 ATF2P15336 505 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 SFNP31947 248 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 USP17L24Q0WX57 530 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 SPP2Q13103 211 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 SDCCAG8Q86SQ7 713 aaPredicted RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 THEM5Q8N1Q8 247 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 C7orf31Q8N865 590 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 NEK9Q8TD19 979 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 CDKL2Q92772 493 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 DPF2Q92785 391 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 PPP1R16BQ96T49 567 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 ACAD9Q9H845 621 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 MRPL47Q9HD33 250 aaKnown RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 TOPORSQ9NS56 1045 aaPredicted RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 ALS2Q96Q42 1657 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 ESYT2A0FGR8 921 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 ENTPD3O75355 529 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 DDNO94850 711 aaPredicted RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 ZWINTO95229 277 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 PLCG1P19174 1290 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 ARL4AP40617 200 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 MXI1P50539 228 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 CCDC62Q6P9F0 684 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 C4orf50Q6ZRC1 276 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 B4GALNT4Q76KP1 1039 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 LINC00301Q8NCQ3 95 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 PPFIBP2Q8ND30 876 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 RNF139Q8WU17 664 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 GBA2Q9HCG7 927 aaPredicted RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 RWDD2AQ9UIY3 292 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 ZNF148Q9UQR1 794 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 ASB14A6NK59 587 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 PLEKHA8P1O95397 391 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 OSTNP61366 133 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 SNAPC2Q13487 334 aa9.15□□□□□ -0.94
UBR4-206ENST00000419533 C17orf53Q8N3J3 647 aaPredicted RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 RYBPQ8N488 228 aaPredicted RBP9.15□□□□□ -0.94
UBR4-206ENST00000419533 NOL3O60936 208 aaKnown RBP9.15□□□□□ -0.95
UBR4-206ENST00000419533 MAPK4P31152 587 aa9.15□□□□□ -0.95
UBR4-206ENST00000419533 ORC2Q13416 577 aaPredicted RBP9.15□□□□□ -0.95
UBR4-206ENST00000419533 NECTIN1Q15223 517 aa9.15□□□□□ -0.95
UBR4-206ENST00000419533 PFKFB3Q16875 520 aaPredicted RBP9.15□□□□□ -0.95
UBR4-206ENST00000419533 ZNF653Q96CK0 615 aa9.15□□□□□ -0.95
UBR4-206ENST00000419533 THAP9Q9H5L6 903 aa9.15□□□□□ -0.95
UBR4-206ENST00000419533 ZNF70Q9UC06 446 aaPredicted RBP9.15□□□□□ -0.95
UBR4-206ENST00000419533 DDX41Q9UJV9 622 aaKnown RBP9.15□□□□□ -0.95
UBR4-206ENST00000419533 KCNH4Q9UQ05 1017 aa9.15□□□□□ -0.95
UBR4-206ENST00000419533 PASKQ96RG2 1323 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 STK36Q9NRP7 1315 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 FAM170AA1A519 330 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 CIITAP33076 1130 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 GKAP1Q5VSY0 366 aaPredicted RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 KAZNQ674X7 775 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 PPP4R1Q8TF05 950 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 TMEM106CQ9BVX2 250 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 KIAA1586Q9HCI6 787 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 EPN1Q9Y6I3 576 aaPredicted RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 IKBKBO14920 756 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 CCNE1P24864 410 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 PPFIA1Q13136 1202 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 GRM4Q14833 912 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 ALX1Q15699 326 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 DNAJC24Q6P3W2 148 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 ANKRD13AQ8IZ07 590 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 URGCPQ8TCY9 931 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 FAM20AQ96MK3 541 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 PPP2R2CQ9Y2T4 447 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 HEXIM1O94992 359 aaKnown RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 S100BP04271 92 aaPredicted RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 DDIT3P35638 169 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 CXCL9Q07325 125 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 KRT71Q3SY84 523 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 ARHGAP24Q8N264 748 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 ELMOD1Q8N336 334 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 HEXIM2Q96MH2 286 aaKnown RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 TTC1Q99614 292 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 ZNF302Q9NR11 478 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 GINM1Q9NU53 330 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 GCNT4Q9P109 453 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 PLCH1Q4KWH8 1693 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 DENND3A2RUS2 1198 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 CETPP11597 493 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 LRRC63Q05C16 580 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 MESDQ14696 234 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 CEP85LQ5SZL2 805 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 KCNV1Q6PIU1 500 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 CEP95Q96GE4 821 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 BHMT2Q9H2M3 363 aa9.14□□□□□ -0.95
UBR4-206ENST00000419533 UBE2TQ9NPD8 197 aaPredicted RBP9.14□□□□□ -0.95
UBR4-206ENST00000419533 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms