RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 DPH5Q9H2P9 285 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 NOC2LQ9Y3T9 749 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 PGRMC1O00264 195 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 IFI16Q16666 785 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 MICALCLQ6ZW33 695 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 MREGQ8N565 214 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 U2AF1L4Q8WU68 220 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 ISCUQ9H1K1 167 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 DHX36Q9H2U1 1008 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 SERPINB13Q9UIV8 391 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 DAPK3O43293 454 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 FLOT1O75955 427 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 GCFC2P16383 781 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 POTEAQ6S8J7 498 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 MYCBPAPQ8TBZ2 947 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 MYBP10242 640 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 TMOD1P28289 359 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 SCNN1DP51172 638 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 CELF4Q9BZC1 486 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 DDX4Q9NQI0 724 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 ONECUT3O60422 494 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 PON1P27169 355 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 CASP4P49662 377 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 ITGB3BPQ13352 177 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 TRAPPC3LQ5T215 181 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 VPS36Q86VN1 386 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 RBM46Q8TBY0 533 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 NEUROG2Q9H2A3 272 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 FBXL5Q9UKA1 691 aa16.57■□□□□ 0.24
SEMA3B-203ENST00000419007 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 FAM196BA6NMK8 535 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 RSPH10B2B2RC85 870 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 GFPT2O94808 682 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 H2AFZP0C0S5 128 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 RSPH10BP0C881 870 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 FLT3P36888 993 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 IKQ13123 557 aaPredicted RBP16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 KNOP1Q1ED39 458 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 H2AFVQ71UI9 128 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 LRRC45Q96CN5 670 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 PBKQ96KB5 322 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 REEP2Q9BRK0 252 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 SEPT11Q9NVA2 429 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 GCNT4Q9P109 453 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 DNM3Q9UQ16 869 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 AKAP3O75969 853 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 GCNT3O95395 438 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 ABCB4P21439 1286 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 CLK2P49760 499 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 ANO3Q9BYT9 981 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 TMBIM4Q9HC24 238 aa16.56■□□□□ 0.24
SEMA3B-203ENST00000419007 TTI1O43156 1089 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 SNHG28P0DPA3 235 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 GUCY2CP25092 1073 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 QRICH1Q2TAL8 776 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 EDRF1Q3B7T1 1238 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 USH1GQ495M9 461 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 CD302Q8IX05 232 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 TPCN2Q8NHX9 752 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.242e-10■■□□□ 13.4
SEMA3B-203ENST00000419007 IKZF4Q9H2S9 585 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 POLLQ9UGP5 575 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 ATP2C2O75185 946 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 KCNA1Q09470 495 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 SF3A3Q12874 501 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■□□□□ 10.4
SEMA3B-203ENST00000419007 CUL1Q13616 776 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 UAP1Q16222 522 aaPredicted RBP16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 RC3H1Q5TC82 1133 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 MCTP2Q6DN12 878 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 FOXR2Q6PJQ5 311 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 ARFGAP2Q8N6H7 521 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 AJAP1Q9UKB5 411 aaPredicted RBP16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 NOVA2Q9UNW9 492 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 MYH7BA7E2Y1 1941 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 SLC12A3P55017 1021 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 GPATCH4Q5T3I0 446 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 KCNV1Q6PIU1 500 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 PLCB1Q9NQ66 1216 aa16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 BZW2Q9Y6E2 419 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-203ENST00000419007 IL1R1P14778 569 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 HOXA7P31268 230 aaPredicted RBP16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 IFFO1Q0D2I5 559 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 GIT2Q14161 759 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 FAM196AQ6ZSG2 479 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 SCFD2Q8WU76 684 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 BHMT2Q9H2M3 363 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
SEMA3B-203ENST00000419007 RGS17Q9UGC6 210 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms