RNA–Protein interactions for RNA: ENST00000419004.2

SNX5-203, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-203ENST00000419004 SYTL5Q8TDW5 730 aaPredicted RBP17.31■□□□□ 0.36
SNX5-203ENST00000419004 TOP1MTQ969P6 601 aa17.31■□□□□ 0.36
SNX5-203ENST00000419004 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
SNX5-203ENST00000419004 MTA3Q9BTC8 594 aa17.31■□□□□ 0.36
SNX5-203ENST00000419004 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
SNX5-203ENST00000419004 BRPF3Q9ULD4 1205 aa17.31■□□□□ 0.36
SNX5-203ENST00000419004 LCTP09848 1927 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 LGR5O75473 907 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 CALM1P0DP23 149 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 CALM2P0DP24 149 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 CALM3P0DP25 149 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 EIF2AK2P19525 551 aaKnown RBP17.3■□□□□ 0.36
SNX5-203ENST00000419004 APOBRQ0VD83 1088 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 MTMR8Q96EF0 704 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 BORCS6Q96GS4 357 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
SNX5-203ENST00000419004 USP26Q9BXU7 913 aa17.3■□□□□ 0.36
SNX5-203ENST00000419004 SEC63Q9UGP8 760 aaKnown RBP17.3■□□□□ 0.36
SNX5-203ENST00000419004 SMG1Q96Q15 3661 aaKnown RBP17.29■□□□□ 0.36
SNX5-203ENST00000419004 GOLGA8AA7E2F4 631 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 ZBTB43O43298 467 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 HMGB1P09429 215 aaKnown RBP17.29■□□□□ 0.36
SNX5-203ENST00000419004 CKBP12277 381 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 GNAQP50148 359 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 CAMK1Q14012 370 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 ARHGEF16Q5VV41 709 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 BRF1Q92994 677 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 RMDN3Q96TC7 470 aa17.29■□□□□ 0.36
SNX5-203ENST00000419004 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
SNX5-203ENST00000419004 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
SNX5-203ENST00000419004 USP9XQ93008 2570 aaPredicted RBP17.29■□□□□ 0.36
SNX5-203ENST00000419004 SRRM3A6NNA2 597 aaPredicted RBP17.28■□□□□ 0.36
SNX5-203ENST00000419004 STK25O00506 426 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 ASGR2P07307 311 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 MYCLP12524 364 aaPredicted RBP17.28■□□□□ 0.36
SNX5-203ENST00000419004 RBL2Q08999 1139 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 RTN1Q16799 776 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 SOWAHCQ53LP3 525 aaPredicted RBP17.28■□□□□ 0.36
SNX5-203ENST00000419004 N4BP2L1Q5TBK1 243 aaPredicted RBP17.28■□□□□ 0.36
SNX5-203ENST00000419004 TAPT1Q6NXT6 567 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 SEPT14Q6ZU15 432 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 DDX1Q92499 740 aaKnown RBP17.28■□□□□ 0.36
SNX5-203ENST00000419004 KCNB2Q92953 911 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 IL17RAQ96F46 866 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
SNX5-203ENST00000419004 C2CD4DB7Z1M9 353 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.36
SNX5-203ENST00000419004 OPLAHO14841 1288 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 PPFIA3O75145 1194 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 POLR2MP0CAP2 368 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 PSMA5P28066 241 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.36
SNX5-203ENST00000419004 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 SGMS1Q86VZ5 419 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 RGS22Q8NE09 1264 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 DBF4BQ8NFT6 615 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 WDR11Q9BZH6 1224 aa17.27■□□□□ 0.36
SNX5-203ENST00000419004 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
SNX5-203ENST00000419004 B4DLN1 442 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 SORBS3O60504 671 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 TGM1P22735 817 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 MRPL12P52815 198 aaKnown RBP17.26■□□□□ 0.35
SNX5-203ENST00000419004 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 DNERQ8NFT8 737 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 NSUN6Q8TEA1 469 aaKnown RBP17.26■□□□□ 0.35
SNX5-203ENST00000419004 DHX38Q92620 1227 aaKnown RBP17.26■□□□□ 0.35
SNX5-203ENST00000419004 COPS5Q92905 334 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 GPKOWQ92917 476 aaPredicted RBP eCLIP17.26■□□□□ 0.359e-6■■□□□ 14.5
SNX5-203ENST00000419004 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 PLVAPQ9BX97 442 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 ERVK-5Q9HDB9 667 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 FBXL21Q9UKT6 434 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 PLAGL2Q9UPG8 496 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 CACNA1IQ9P0X4 2223 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 NBEAQ8NFP9 2946 aa17.26■□□□□ 0.35
SNX5-203ENST00000419004 SPTLC1O15269 473 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 KPNA6O60684 536 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 CDC27P30260 824 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 METAP2P50579 478 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNX5-203ENST00000419004 TRAF1Q13077 416 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 DUSP28Q4G0W2 176 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 HEATR3Q7Z4Q2 680 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 SIX5Q8N196 739 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 MORC4Q8TE76 937 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 IFIH1Q9BYX4 1025 aaKnown RBP17.25■□□□□ 0.35
SNX5-203ENST00000419004 S1PR5Q9H228 398 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 TLE6Q9H808 572 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 PXMP2Q9NR77 195 aa17.25■□□□□ 0.35
SNX5-203ENST00000419004 DSPP15924 2871 aaKnown RBP17.25■□□□□ 0.35
SNX5-203ENST00000419004 TMEM8BA6NDV4 472 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms