RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 PCDHA2Q9Y5H9 948 aa11.23□□□□□ -0.61
HMGA1P6-201ENST00000418454 UBE4BO95155 1302 aa11.23□□□□□ -0.61
HMGA1P6-201ENST00000418454 ARHGEF35A5YM69 484 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 H0YCG3 227 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 EIF3DO15371 548 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 GAS2O43903 313 aaKnown RBP11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 COBLO75128 1261 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 LGR5O75473 907 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 DGAT1O75907 488 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 IGHA2P01877 340 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 ZNF18P17022 549 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 UBA1P22314 1058 aaKnown RBP11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 RGS2P41220 211 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 PRCPP42785 496 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 RARRES1P49788 294 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 PSMC6P62333 389 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 SP2Q02086 613 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 CTTNQ14247 550 aaKnown RBP11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 MYBPC2Q14324 1141 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 NFIL3Q16649 462 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 ARMCX2Q7L311 632 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 FAM114A1Q8IWE2 563 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 MCPH1Q8NEM0 835 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 ANKRD20A12PQ8NF67 263 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 STAMQ92783 540 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 DRC1Q96MC2 740 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 JPH2Q9BR39 696 aaPredicted RBP11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 TINF2Q9BSI4 451 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 THAP9Q9H5L6 903 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 MLXIPQ9HAP2 919 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 PARVGQ9HBI0 331 aa11.22□□□□□ -0.61
HMGA1P6-201ENST00000418454 EMSYQ7Z589 1322 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 IGSF9BQ9UPX0 1349 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 GOLGA6L6A8MZA4 724 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 CHMP2AO43633 222 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 PPFIA4O75335 1185 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 TBCAO75347 108 aaKnown RBP11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 GNA14O95837 355 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 PGK2P07205 417 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 EEF1GP26641 437 aaKnown RBP11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 CYP4A11Q02928 519 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 STK4Q13043 487 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 COASYQ13057 564 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 HSP90AA2PQ14568 343 aaPredicted RBP11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 ARHGEF6Q15052 776 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 EDRF1Q3B7T1 1238 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 FAM26FQ5R3K3 315 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 SEPT14Q6ZU15 432 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 DHX37Q8IY37 1157 aaKnown RBP11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 AOPEPQ8N6M6 819 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 GOLGA5Q8TBA6 731 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 ZNF507Q8TCN5 953 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 KIFAP3Q92845 792 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 P2RX5Q93086 422 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 HVCN1Q96D96 273 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 KATNBL1Q9H079 304 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 ZNF302Q9NR11 478 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 PDLIM7Q9NR12 457 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 GJD2Q9UKL4 321 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 NFE2L3Q9Y4A8 694 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
HMGA1P6-201ENST00000418454 LOXHD1Q8IVV2 1947 aa11.21□□□□□ -0.62
HMGA1P6-201ENST00000418454 GSTTP1A0A1W2PQM5 241 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 PDXKO00764 312 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 STBD1O95210 358 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 GH1P01241 217 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 SSBP05455 408 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 TXNP10599 105 aaKnown RBP11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 IDEP14735 1019 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 CD44P16070 742 aaKnown RBP11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 RFC5P40937 340 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 STAT5BP51692 787 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 FCGRTP55899 365 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 ACVR2BQ13705 512 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 DUSP28Q4G0W2 176 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 ISM2Q6H9L7 571 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 SWSAP1Q6NVH7 229 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 PADI6Q6TGC4 694 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 CYFIP1Q7L576 1253 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 EPM2AIP1Q7L775 607 aaPredicted RBP11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 PPTC7Q8NI37 304 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 SPIRE2Q8WWL2 714 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 NELFBQ8WX92 580 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 CEP63Q96MT8 703 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 GPR20Q99678 358 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 TSG101Q99816 390 aa11.2□□□□□ -0.62
HMGA1P6-201ENST00000418454 REEP2Q9BRK0 252 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms