RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 XBP1P17861 261 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 DEFB103AP81534 67 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 RABEP1Q15276 862 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 UGCGQ16739 394 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 NEK8Q86SG6 692 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 DBF4BQ8NFT6 615 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 PHOSPHO2Q8TCD6 241 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 HAS1Q92839 578 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 TBC1D32Q96NH3 1257 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 LLPHQ9BRT6 129 aaKnown RBP23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 DDX25Q9UHL0 483 aaKnown RBP23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 TRPC6Q9Y210 931 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 PCDHA2Q9Y5H9 948 aa23.33■■□□□ 1.33
PKNOX1-202ENST00000418336 MYH9P35579 1960 aaKnown RBP23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 BTBD18B2RXH4 712 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 STBD1O95210 358 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 IGBP1P78318 339 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 GRIN2CQ14957 1233 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 LETM2Q2VYF4 491 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 LRCH2Q5VUJ6 765 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 FAM160B1Q5W0V3 765 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 PDXDC2PQ6P474 469 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 MTHFD1LQ6UB35 978 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 DNAJB3Q8WWF6 145 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 ZSCAN31Q96LW9 406 aaPredicted RBP23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 SLC9A7Q96T83 725 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 CDX2Q99626 313 aaPredicted RBP23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 GABBR1Q9UBS5 961 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 VAV3Q9UKW4 847 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 STXBP5LQ9Y2K9 1186 aa23.32■■□□□ 1.32
PKNOX1-202ENST00000418336 COL1A2P08123 1366 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 CCDC194A0A1B0GVG4 234 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 WDR64B1ANS9 1081 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 BACH1O14867 736 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 HBP1O60381 514 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 PSAPP07602 524 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 KRT2P35908 639 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 TMCO2Q7Z6W1 182 aaPredicted RBP23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 HERC6Q8IVU3 1022 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 TEKT3Q9BXF9 490 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 NKX2-4Q9H2Z4 354 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 SH2B1Q9NRF2 756 aaPredicted RBP23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 DISC1Q9NRI5 854 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 PCDHA11Q9Y5I1 949 aa23.31■■□□□ 1.32
PKNOX1-202ENST00000418336 SPTBN5Q9NRC6 3674 aaKnown RBP23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 SMIM35A0A1B0GVV1 85 aa23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 ABHD14A-ACY1A0A1B0GW23 586 aa23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 GAS7O60861 476 aa23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 RAB30Q15771 203 aa23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 DIS3L2Q8IYB7 885 aaKnown RBP23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 LINC01465Q8N7H1 131 aa23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 BBXQ8WY36 941 aaPredicted RBP23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 CEP89Q96ST8 783 aa23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 ZNF576Q9H609 170 aa23.3■■□□□ 1.32
PKNOX1-202ENST00000418336 EML1O00423 815 aa23.29■■□□□ 1.32
PKNOX1-202ENST00000418336 C22orf31O95567 290 aa23.29■■□□□ 1.32
PKNOX1-202ENST00000418336 GCFC2P16383 781 aaKnown RBP23.29■■□□□ 1.32
PKNOX1-202ENST00000418336 JAK3P52333 1124 aa23.29■■□□□ 1.32
PKNOX1-202ENST00000418336 SPIRE1Q08AE8 756 aa23.29■■□□□ 1.32
PKNOX1-202ENST00000418336 LPIN1Q14693 890 aa23.29■■□□□ 1.32
PKNOX1-202ENST00000418336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.29■■□□□ 1.32
PKNOX1-202ENST00000418336 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 CHMP2AO43633 222 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 KLRC1P26715 233 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 SFNP31947 248 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 FOSBP53539 338 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 MRPS6P82932 125 aaKnown RBP23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 PPP2R5CQ13362 524 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 ZNF484Q5JVG2 852 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 FBXO47Q5MNV8 452 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 POTEDQ86YR6 584 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 KIAA0319LQ8IZA0 1049 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 RDM1Q8NG50 284 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 CDY2AQ9Y6F7 541 aa23.28■■□□□ 1.32
PKNOX1-202ENST00000418336 CCNT1O60563 726 aaKnown RBP23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 IKBKEQ14164 716 aa23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 TARBP2Q15633 366 aaKnown RBP23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 MYLIPQ8WY64 445 aa23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 FAM20AQ96MK3 541 aa23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 AGO3Q9H9G7 860 aaKnown RBP23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 LOXHD1Q8IVV2 1947 aa23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 KDM3AQ9Y4C1 1321 aa23.27■■□□□ 1.32
PKNOX1-202ENST00000418336 PRUNE2Q8WUY3 3088 aa23.27■■□□□ 1.31
PKNOX1-202ENST00000418336 EVPLQ92817 2033 aa23.26■■□□□ 1.31
PKNOX1-202ENST00000418336 TBX3O15119 743 aa23.26■■□□□ 1.31
PKNOX1-202ENST00000418336 GHRP10912 638 aa23.26■■□□□ 1.31
PKNOX1-202ENST00000418336 SPRED2Q7Z698 418 aa23.26■■□□□ 1.31
PKNOX1-202ENST00000418336 TNPO1Q92973 898 aaKnown RBP23.26■■□□□ 1.31
PKNOX1-202ENST00000418336 FAM49AQ9H0Q0 323 aaPredicted RBP23.26■■□□□ 1.31
PKNOX1-202ENST00000418336 MSRAQ9UJ68 235 aa23.26■■□□□ 1.31
PKNOX1-202ENST00000418336 COL4A6Q14031 1691 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 LCHNA4D1U4 455 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 EFCAB14O75071 495 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 GJB5O95377 273 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 OATP04181 439 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 CA3P07451 260 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 GUCY1B3Q02153 619 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 PRKCEQ02156 737 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 FBXO18Q8NFZ0 1043 aa23.25■■□□□ 1.31
PKNOX1-202ENST00000418336 SEPT8Q92599 483 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms