RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 TNFRSF25Q93038 417 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 ZBTB10Q96DT7 871 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 FAM167AQ96KS9 214 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 FOXP1Q9H334 677 aaPredicted RBP12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 GINS2Q9Y248 185 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 CAND2O75155 1236 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 OATP04181 439 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 KLRC1P26715 233 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 HOXC8P31273 242 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 TXKP42681 527 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 TMEM62Q0P6H9 643 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 TRIM71Q2Q1W2 868 aaKnown RBP12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 ZNF484Q5JVG2 852 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 MTHFD1LQ6UB35 978 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 NOSTRINQ8IVI9 506 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 RDM1Q8NG50 284 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 FAM161BQ96MY7 647 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 KCNMB3Q9NPA1 279 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 CXXC1Q9P0U4 656 aaPredicted RBP12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 SEPT9Q9UHD8 586 aaPredicted RBP12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 CEP131Q9UPN4 1083 aa12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 MAFBQ9Y5Q3 323 aaPredicted RBP12.44□□□□□ -0.42
TM9SF4-203ENST00000417389 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 GRXCR1A8MXD5 290 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 TBX3O15119 743 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 NBNO60934 754 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 ATP2A2P16615 1042 aaKnown RBP12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 SMAD3P84022 425 aaKnown RBP12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 RBL2Q08999 1139 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 IKBKEQ14164 716 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 ZNF174Q15697 407 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 UGCGQ16739 394 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 MARCH8Q5T0T0 291 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 IER5Q5VY09 327 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 CNKSR3Q6P9H4 555 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 DEFB123Q8N688 67 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 SEPT8Q92599 483 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 PPP1R16BQ96T49 567 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 MSRAQ9UJ68 235 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 PCDHA12Q9UN75 941 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 COL1A2P08123 1366 aa12.43□□□□□ -0.42
TM9SF4-203ENST00000417389 IGSF9BQ9UPX0 1349 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 MBLAC1A4D2B0 266 aaPredicted RBP12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 DKC1O60832 514 aaKnown RBP eCLIP12.42□□□□□ -0.423e-7■□□□□ 9
TM9SF4-203ENST00000417389 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 HSP90AA1P07900 732 aaKnown RBP12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 GHRP10912 638 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 ATP4AP20648 1035 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 PSMC5P62195 406 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 ADAM17P78536 824 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 MRPS6P82932 125 aaKnown RBP12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 PPP2R5CQ13362 524 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 MTERF2Q49AM1 385 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 FAM109BQ6ICB4 259 aaPredicted RBP12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 Q7L0L9 218 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 HAS1Q92839 578 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 CCDC43Q96MW1 224 aaKnown RBP12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 ZBED2Q9BTP6 218 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 AKT3Q9Y243 479 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 PCDHA2Q9Y5H9 948 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 CDY2AQ9Y6F7 541 aa12.42□□□□□ -0.42
TM9SF4-203ENST00000417389 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 LAMA3Q16787 3333 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 SMIM35A0A1B0GVV1 85 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 VPS37CA5D8V6 355 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 KIF28PB7ZC32 967 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 EML1O00423 815 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 P4HBP07237 508 aaKnown RBP12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 TMOD1P28289 359 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 QARSP47897 775 aaKnown RBP12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 RABGGTBP53611 331 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 TBC1D8BQ0IIM8 1120 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 RAB30Q15771 203 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 XKR3Q5GH77 459 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 FAM117BQ6P1L5 589 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 HSCBQ8IWL3 235 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 TPH2Q8IWU9 490 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 TIFAQ96CG3 184 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 IFIH1Q9BYX4 1025 aaKnown RBP12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 VAV3Q9UKW4 847 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 TRPV2Q9Y5S1 764 aa12.41□□□□□ -0.42
TM9SF4-203ENST00000417389 SCN5AQ14524 2016 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms