RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TUBE1Q9UJT0 475 aa25.94■■□□□ 1.74
SMARCB1-205ENST00000417137 COL1A2P08123 1366 aa25.94■■□□□ 1.74
SMARCB1-205ENST00000417137 OATP04181 439 aa25.93■■□□□ 1.74
SMARCB1-205ENST00000417137 FPGSQ05932 587 aa25.93■■□□□ 1.74
SMARCB1-205ENST00000417137 TAF2Q6P1X5 1199 aa25.93■■□□□ 1.74
SMARCB1-205ENST00000417137 TRMT1LQ7Z2T5 733 aaKnown RBP25.93■■□□□ 1.74
SMARCB1-205ENST00000417137 RAB34Q9BZG1 259 aa25.93■■□□□ 1.74
SMARCB1-205ENST00000417137 CEP290O15078 2479 aa25.93■■□□□ 1.74
SMARCB1-205ENST00000417137 MBLAC1A4D2B0 266 aaPredicted RBP25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 BMP15O95972 392 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 RPLP2P05387 115 aaKnown RBP25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 BMP8BP34820 402 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 TECP42680 631 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 PRKCEQ02156 737 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 RBL2Q08999 1139 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 PPIGQ13427 754 aaKnown RBP eCLIP25.92■■□□□ 1.742e-8■■□□□ 13.4
SMARCB1-205ENST00000417137 XKR3Q5GH77 459 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 RSPH3Q86UC2 560 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 BANK1Q8NDB2 785 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 NEK9Q8TD19 979 aa25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 UBE2OQ9C0C9 1292 aaKnown RBP25.92■■□□□ 1.74
SMARCB1-205ENST00000417137 ZNF862O60290 1169 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 CAND2O75155 1236 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 PARNO95453 639 aaKnown RBP25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 PRPHP41219 470 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 CCL23P55773 120 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 RESTQ13127 1097 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 UGCGQ16739 394 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 MARCH8Q5T0T0 291 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 CHRDL2Q6WN34 429 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 ERMNQ8TAM6 284 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 DHX38Q92620 1227 aaKnown RBP25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 ZSWIM4Q9H7M6 989 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 STK24Q9Y6E0 443 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 DNAH12Q6ZR08 3092 aa25.91■■□□□ 1.74
SMARCB1-205ENST00000417137 CKBP12277 381 aa25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 SELPP16109 830 aa25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 THPOP40225 353 aa25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 FXR2P51116 673 aaKnown RBP eCLIP25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 PDIA5Q14554 519 aa25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 DTHD1Q6ZMT9 781 aa25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 RPUSD2Q8IZ73 545 aaKnown RBP25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 EIF2AK1Q9BQI3 630 aaKnown RBP25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 PCDHA2Q9Y5H9 948 aa25.9■■□□□ 1.74
SMARCB1-205ENST00000417137 UMODL1Q5DID0 1318 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 DDX11L8A8MPP1 907 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 MAGEB2O15479 319 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 IQCF3P0C7M6 154 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 KLRC1P26715 233 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 RFC2P35250 354 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 ATP2C1P98194 919 aaPredicted RBP25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 TRIM71Q2Q1W2 868 aaKnown RBP25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 MTHFD1LQ6UB35 978 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 TPH2Q8IWU9 490 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 C4orf19Q8IY42 314 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 DYDC2Q96IM9 177 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 HSD17B14Q9BPX1 270 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 LXNQ9BS40 222 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 NIFKQ9BYG3 293 aaKnown RBP25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 RGL1Q9NZL6 768 aa25.89■■□□□ 1.74
SMARCB1-205ENST00000417137 POTEMA6NI47 508 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 SLITRK3O94933 977 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 CSF2RAP15509 400 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 ARL6IP4Q66PJ3 421 aaKnown RBP25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 LRRC8DQ7L1W4 858 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 OTUD6AQ7L8S5 288 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 RPAINQ86UA6 219 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 TRAPPC12Q8WVT3 735 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 WNT8AQ9H1J5 351 aa25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 SEPT9Q9UHD8 586 aaPredicted RBP25.88■■□□□ 1.73
SMARCB1-205ENST00000417137 CYP4A11Q02928 519 aa25.87■■□□□ 1.73
SMARCB1-205ENST00000417137 CTTNQ14247 550 aaKnown RBP25.87■■□□□ 1.73
SMARCB1-205ENST00000417137 ZNF618Q5T7W0 954 aa25.87■■□□□ 1.73
SMARCB1-205ENST00000417137 NME8Q8N427 588 aa25.87■■□□□ 1.73
SMARCB1-205ENST00000417137 SCLYQ96I15 445 aa25.87■■□□□ 1.73
SMARCB1-205ENST00000417137 LRWD1Q9UFC0 647 aa25.87■■□□□ 1.73
SMARCB1-205ENST00000417137 SMIM35A0A1B0GVV1 85 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 RSPH10B2B2RC85 870 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 ZBTB42B2RXF5 422 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 PFKMP08237 780 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 RSPH10BP0C881 870 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 ZSCAN22P10073 491 aaPredicted RBP25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 HAUS3Q68CZ6 603 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 RUFY4Q6ZNE9 571 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 WNT8BQ93098 351 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 TUFT1Q9NNX1 390 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 IL23AQ9NPF7 189 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 PPME1Q9Y570 386 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 TRIOBPQ9H2D6 2365 aa25.86■■□□□ 1.73
SMARCB1-205ENST00000417137 STBD1O95210 358 aa25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 LYPLA2O95372 231 aa25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 TMOD1P28289 359 aa25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 SF3A1Q15459 793 aaKnown RBP25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 EXOC8Q8IYI6 725 aa25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 DNAJB3Q8WWF6 145 aa25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 POLR3CQ9BUI4 534 aaPredicted RBP25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 PRO3102Q9H379 93 aa25.85■■□□□ 1.73
SMARCB1-205ENST00000417137 A0A1W2PPC1 479 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 C22orf31O95567 290 aa25.84■■□□□ 1.73
SMARCB1-205ENST00000417137 YWHABP31946 246 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms