RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 WASF1Q92558 559 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 APBB2Q92870 758 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 FAM49AQ9H0Q0 323 aaPredicted RBP17.69■□□□□ 0.42
ITGB1-204ENST00000417122 SAMM50Q9Y512 469 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 CDH23Q9H251 3354 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 GJB5O95377 273 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 TDP2O95551 362 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 AMHP03971 560 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
ITGB1-204ENST00000417122 ATP4AP20648 1035 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-204ENST00000417122 MTHFD1LQ6UB35 978 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 CKAP2LQ8IYA6 745 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 SLC5A5Q92911 643 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 RIT2Q99578 217 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 IFIH1Q9BYX4 1025 aaKnown RBP17.68■□□□□ 0.42
ITGB1-204ENST00000417122 GJB4Q9NTQ9 266 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 PCDHA2Q9Y5H9 948 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 MAFBQ9Y5Q3 323 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-204ENST00000417122 CDY2AQ9Y6F7 541 aa17.68■□□□□ 0.42
ITGB1-204ENST00000417122 COL1A2P08123 1366 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 CCDC194A0A1B0GVG4 234 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 SMIM35A0A1B0GVV1 85 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 WDR64B1ANS9 1081 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 GAS7O60861 476 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 GHRP10912 638 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 MRPS6P82932 125 aaKnown RBP17.67■□□□□ 0.42
ITGB1-204ENST00000417122 TAP1Q03518 808 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 INF2Q27J81 1249 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 ZNF484Q5JVG2 852 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 LRCH2Q5VUJ6 765 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 FAM117BQ6P1L5 589 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 MOXD1Q6UVY6 613 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 MYOCDQ8IZQ8 938 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 BBXQ8WY36 941 aaPredicted RBP17.67■□□□□ 0.42
ITGB1-204ENST00000417122 GJA10Q969M2 543 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 RAD9AQ99638 391 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 TEKT3Q9BXF9 490 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 GABBR1Q9UBS5 961 aa17.67■□□□□ 0.42
ITGB1-204ENST00000417122 M0QZ92 97 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 CHMP2AO43633 222 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 ARHGEF15O94989 841 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 IGFBP4P22692 258 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 KLRC1P26715 233 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 ADGRE1Q14246 886 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 LPIN1Q14693 890 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 LETM2Q2VYF4 491 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 FBXO47Q5MNV8 452 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 IER5Q5VY09 327 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 TRMT1LQ7Z2T5 733 aaKnown RBP17.66■□□□□ 0.42
ITGB1-204ENST00000417122 NSUN7Q8NE18 718 aaKnown RBP17.66■□□□□ 0.42
ITGB1-204ENST00000417122 OXER1Q8TDS5 423 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 MBOAT7Q96N66 472 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 CERS4Q9HA82 394 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 DISC1Q9NRI5 854 aa17.66■□□□□ 0.42
ITGB1-204ENST00000417122 LOXHD1Q8IVV2 1947 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.65■□□□□ 0.42
ITGB1-204ENST00000417122 LCHNA4D1U4 455 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 PSMD10O75832 226 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 SFNP31947 248 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 JAK3P52333 1124 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 TMEM62Q0P6H9 643 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 PIK3AP1Q6ZUJ8 805 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 NME8Q8N427 588 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 UNC45AQ9H3U1 944 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 DDX25Q9UHL0 483 aaKnown RBP17.65■□□□□ 0.42
ITGB1-204ENST00000417122 TRPV2Q9Y5S1 764 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 IGSF9BQ9UPX0 1349 aa17.65■□□□□ 0.42
ITGB1-204ENST00000417122 EVPLQ92817 2033 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 ZBTB42B2RXF5 422 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 KRT2P35908 639 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 TSHZ1Q6ZSZ6 1077 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 NEK8Q86SG6 692 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.64■□□□□ 0.41
ITGB1-204ENST00000417122 ETNPPLQ8TBG4 499 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 ARNTL2Q8WYA1 636 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 TOP1MTQ969P6 601 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 FAM167AQ96KS9 214 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 CELF4Q9BZC1 486 aaKnown RBP17.64■□□□□ 0.41
ITGB1-204ENST00000417122 BRMS1Q9HCU9 246 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 CEP131Q9UPN4 1083 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 INSL6Q9Y581 213 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 SQORQ9Y6N5 450 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
ITGB1-204ENST00000417122 RFXAPO00287 272 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 SLC37A4O43826 429 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 JAK2O60674 1132 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 UPP2O95045 317 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 ST3GAL1Q11201 340 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 PPP4R3AQ6IN85 833 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 MIER3Q7Z3K6 550 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 RDM1Q8NG50 284 aa17.63■□□□□ 0.41
ITGB1-204ENST00000417122 AGO3Q9H9G7 860 aaKnown RBP17.63■□□□□ 0.41
ITGB1-204ENST00000417122 EPOPA6NHQ4 379 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 ZNF862O60290 1169 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 CCNT1O60563 726 aaKnown RBP17.62■□□□□ 0.41
ITGB1-204ENST00000417122 C22orf31O95567 290 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 OATP04181 439 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms