RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 CEP55Q53EZ4 464 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 BMP2KLQ5H9B9 411 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 MARCH8Q5T0T0 291 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 SPOUT1Q5T280 376 aaKnown RBP12.93□□□□□ -0.34
SNX30-202ENST00000416585 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 NPAS4Q8IUM7 802 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 CMTR2Q8IYT2 770 aaKnown RBP12.93□□□□□ -0.34
SNX30-202ENST00000416585 NME8Q8N427 588 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 TCEANC2Q96MN5 208 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 CELF4Q9BZC1 486 aaKnown RBP12.93□□□□□ -0.34
SNX30-202ENST00000416585 PRKAG3Q9UGI9 489 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 GINS2Q9Y248 185 aa12.93□□□□□ -0.34
SNX30-202ENST00000416585 V9GY48 417 aaPredicted RBP12.93□□□□□ -0.34
SNX30-202ENST00000416585 SMIM35A0A1B0GVV1 85 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 FAM86C2PA6NEL3 165 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 STXBP3O00186 592 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 HBP1O60381 514 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 CDC45O75419 566 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 DGKIO75912 1065 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 MMP1P03956 469 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 SCG2P13521 617 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 AKAP17AQ02040 695 aaKnown RBP12.92□□□□□ -0.34
SNX30-202ENST00000416585 NFX1Q12986 1120 aaKnown RBP12.92□□□□□ -0.34
SNX30-202ENST00000416585 PLCB4Q15147 1175 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 PAN2Q504Q3 1202 aaKnown RBP12.92□□□□□ -0.34
SNX30-202ENST00000416585 MIS18BP1Q6P0N0 1132 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 TRAPPC12Q8WVT3 735 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 POP1Q99575 1024 aaKnown RBP12.92□□□□□ -0.34
SNX30-202ENST00000416585 UPF3BQ9BZI7 483 aaKnown RBP12.92□□□□□ -0.34
SNX30-202ENST00000416585 IGFLR1Q9H665 355 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 AGO4Q9HCK5 861 aaKnown RBP12.92□□□□□ -0.34
SNX30-202ENST00000416585 ZNF302Q9NR11 478 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 BARHL2Q9NY43 387 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 COL1A2P08123 1366 aa12.92□□□□□ -0.34
SNX30-202ENST00000416585 IGSF9BQ9UPX0 1349 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 DENND3A2RUS2 1198 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 GRM6O15303 877 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 ARP10275 920 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 SREBF1P36956 1147 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 NDUFV1P49821 464 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNX30-202ENST00000416585 SETQ01105 290 aaPredicted RBP12.91□□□□□ -0.34
SNX30-202ENST00000416585 NAALADL2Q58DX5 795 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 PDXDC2PQ6P474 469 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 MTHFD1LQ6UB35 978 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
SNX30-202ENST00000416585 CENPQQ7L2Z9 268 aaPredicted RBP12.91□□□□□ -0.34
SNX30-202ENST00000416585 NIPA1Q7RTP0 329 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 PLA2G4DQ86XP0 818 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 CLP1Q92989 425 aaKnown RBP12.91□□□□□ -0.34
SNX30-202ENST00000416585 P2RX5Q93086 422 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
SNX30-202ENST00000416585 ZBTB10Q96DT7 871 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 UIMC1Q96RL1 719 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 PCYT2Q99447 389 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 AGO3Q9H9G7 860 aaKnown RBP12.91□□□□□ -0.34
SNX30-202ENST00000416585 C6orf50Q9HD87 102 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 AAASQ9NRG9 546 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 TMEM260Q9NX78 707 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 ARIH1Q9Y4X5 557 aaPredicted RBP12.91□□□□□ -0.34
SNX30-202ENST00000416585 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
SNX30-202ENST00000416585 RPS6KA5O75582 802 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 KLRC1P26715 233 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 RCAN1P53805 252 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 CLUL1Q15846 466 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 ZNF484Q5JVG2 852 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 JAKMIP3Q5VZ66 844 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 CYP2W1Q8TAV3 490 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNX30-202ENST00000416585 ZNF577Q9BSK1 485 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 RC3H2Q9HBD1 1191 aaKnown RBP12.9□□□□□ -0.34
SNX30-202ENST00000416585 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
SNX30-202ENST00000416585 CD320Q9NPF0 282 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 C1orf112Q9NSG2 853 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 CEP131Q9UPN4 1083 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 MRPL42Q9Y6G3 142 aaKnown RBP12.9□□□□□ -0.34
SNX30-202ENST00000416585 MUC3AQ02505 3323 aa12.9□□□□□ -0.34
SNX30-202ENST00000416585 KDM3AQ9Y4C1 1321 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 BDP1A6H8Y1 2624 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 PRR33A8MZF0 331 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
SNX30-202ENST00000416585 MEIS1O00470 390 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 GPR182O15218 404 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 DCXO43602 365 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 GNA11P29992 359 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 SARSP49591 514 aaKnown RBP12.89□□□□□ -0.35
SNX30-202ENST00000416585 ITGB3BPQ13352 177 aaPredicted RBP12.89□□□□□ -0.35
SNX30-202ENST00000416585 COL9A3Q14050 684 aaPredicted RBP12.89□□□□□ -0.35
SNX30-202ENST00000416585 PFKFB3Q16875 520 aaPredicted RBP12.89□□□□□ -0.35
SNX30-202ENST00000416585 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 TYW1BQ6NUM6 668 aa12.89□□□□□ -0.35
SNX30-202ENST00000416585 ADHFE1Q8IWW8 467 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms