RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 GTPBP6O43824 516 aaPredicted RBP15.91■□□□□ 0.14
SF3B1-204ENST00000414963 PTGS1P23219 599 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 CTCFP49711 727 aaPredicted RBP15.91■□□□□ 0.14
SF3B1-204ENST00000414963 STAT5BP51692 787 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 MCM6Q14566 821 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 XKR3Q5GH77 459 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 TLK2Q86UE8 772 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 SPATA20Q8TB22 786 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 C7orf25Q9BPX7 421 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 AP5M1Q9H0R1 490 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 UPF3AQ9H1J1 476 aaKnown RBP15.91■□□□□ 0.14
SF3B1-204ENST00000414963 SMARCAD1Q9H4L7 1026 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 AZI2Q9H6S1 392 aa15.91■□□□□ 0.14
SF3B1-204ENST00000414963 ZBTB39O15060 712 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 INHAP05111 366 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 MMP3P08254 477 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 ATP4AP20648 1035 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 CCND3P30281 292 aaPredicted RBP15.9■□□□□ 0.14
SF3B1-204ENST00000414963 YWHABP31946 246 aaKnown RBP15.9■□□□□ 0.14
SF3B1-204ENST00000414963 CPT1AP50416 773 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 GJA9P57773 515 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 DPYDQ12882 1025 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 DGKDQ16760 1214 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 ZSCAN23Q3MJ62 389 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 NT5DC1Q5TFE4 455 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 OTUD6AQ7L8S5 288 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 PIGOQ8TEQ8 1089 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 NIFKQ9BYG3 293 aaKnown RBP15.9■□□□□ 0.14
SF3B1-204ENST00000414963 KCND2Q9NZV8 630 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 KIAA1468Q9P260 1216 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
SF3B1-204ENST00000414963 MSCO60682 206 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 RARBP10826 455 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 AFMP43652 599 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 SARSP49591 514 aaKnown RBP15.89■□□□□ 0.13
SF3B1-204ENST00000414963 RARRES1P49788 294 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 PRKCEQ02156 737 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 PNOCQ13519 176 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
SF3B1-204ENST00000414963 ANO5Q75V66 913 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 CTU1Q7Z7A3 348 aaKnown RBP15.89■□□□□ 0.13
SF3B1-204ENST00000414963 GRAMD1CQ8IYS0 662 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 FAM167AQ96KS9 214 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 C16orf70Q9BSU1 422 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 TRIM9Q9C026 710 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 BHMT2Q9H2M3 363 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 NRBP2Q9NSY0 501 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 PPME1Q9Y570 386 aa15.89■□□□□ 0.13
SF3B1-204ENST00000414963 A0A087WWV3 80 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 MYMKA6NI61 221 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 KPNA6O60684 536 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 SMC2O95347 1197 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 OATP04181 439 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 LGALS2P05162 132 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 HSPA1AP0DMV8 641 aaKnown RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 HSPA1BP0DMV9 641 aaKnown RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 CYP11B2P19099 503 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 CNGA1P29973 690 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 PKN2Q16513 984 aaKnown RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 FSCN1Q16658 493 aaKnown RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 ARSHQ5FYA8 562 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 C1orf186Q6ZWK4 172 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 ATP8B4Q8TF62 1192 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 STAMQ92783 540 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 GLG1Q92896 1179 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 LENG1Q96BZ8 264 aaPredicted RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 GSDMAQ96QA5 445 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 SPC25Q9HBM1 224 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 HMX1Q9NP08 348 aaPredicted RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 BMP2KQ9NSY1 1161 aaPredicted RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 ERAP1Q9NZ08 941 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 DDX20Q9UHI6 824 aaKnown RBP15.88■□□□□ 0.13
SF3B1-204ENST00000414963 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
SF3B1-204ENST00000414963 PVALEFA0A1B0GWK0 134 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 ARHGEF35A5YM69 484 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 LBX1P52954 281 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 ZNF445P59923 1031 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 CUL4BQ13620 913 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 TARBP2Q15633 366 aaKnown RBP15.87■□□□□ 0.13
SF3B1-204ENST00000414963 UTP14CQ5TAP6 766 aaKnown RBP15.87■□□□□ 0.13
SF3B1-204ENST00000414963 RINT1Q6NUQ1 792 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 GPBP1Q86WP2 473 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 CKAP2LQ8IYA6 745 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
SF3B1-204ENST00000414963 DDX12PQ92771 950 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 DNAJC19Q96DA6 116 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 SYNRGQ9UMZ2 1314 aa15.87■□□□□ 0.13
SF3B1-204ENST00000414963 H3BRB1 525 aa15.86■□□□□ 0.13
SF3B1-204ENST00000414963 HBP1O60381 514 aa15.86■□□□□ 0.13
SF3B1-204ENST00000414963 ADAMTS4O75173 837 aa15.86■□□□□ 0.13
SF3B1-204ENST00000414963 F2P00734 622 aa15.86■□□□□ 0.13
SF3B1-204ENST00000414963 SSBP05455 408 aaKnown RBP eCLIP15.86■□□□□ 0.13
SF3B1-204ENST00000414963 GUCY2CP25092 1073 aa15.86■□□□□ 0.13
SF3B1-204ENST00000414963 CST5P28325 142 aaPredicted RBP15.86■□□□□ 0.13
SF3B1-204ENST00000414963 DHX8Q14562 1220 aaKnown RBP15.86■□□□□ 0.13
SF3B1-204ENST00000414963 KCNB1Q14721 858 aa15.86■□□□□ 0.13
SF3B1-204ENST00000414963 PLCB4Q15147 1175 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms