RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 ETNPPLQ8TBG4 499 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 PHOSPHO2Q8TCD6 241 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 TRAPPC12Q8WVT3 735 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 MYLIPQ8WY64 445 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 SLC5A5Q92911 643 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 NKX2-4Q9H2Z4 354 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 TBC1D22BQ9NU19 505 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 ORC3Q9UBD5 711 aaPredicted RBP12.4□□□□□ -0.42
A1CF-208ENST00000414883 TUBE1Q9UJT0 475 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 PCDHA11Q9Y5I1 949 aa12.4□□□□□ -0.42
A1CF-208ENST00000414883 MAFBQ9Y5Q3 323 aaPredicted RBP12.4□□□□□ -0.42
A1CF-208ENST00000414883 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
A1CF-208ENST00000414883 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 TTC3P53804 2025 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 ZNF862O60290 1169 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 PSMD10O75832 226 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 CTSHP09668 335 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 ACTN1P12814 892 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 RAB30Q15771 203 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 DBF4BQ8NFT6 615 aa12.39□□□□□ -0.43
A1CF-208ENST00000414883 IGSF9BQ9UPX0 1349 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 BRWD1Q9NSI6 2320 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 ABHD14A-ACY1A0A1B0GW23 586 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 FAM205CA6NFA0 338 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 RRN3P2A6NIE6 340 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 SLC37A4O43826 429 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 SLC26A2P50443 739 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 IGBP1P78318 339 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 KRT76Q01546 638 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 ADGRE1Q14246 886 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 INF2Q27J81 1249 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 SWSAP1Q6NVH7 229 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 TAF2Q6P1X5 1199 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
A1CF-208ENST00000414883 SPRED2Q7Z698 418 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 SMAP1Q8IYB5 467 aaPredicted RBP12.38□□□□□ -0.43
A1CF-208ENST00000414883 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 DNAJB3Q8WWF6 145 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 SLC9A7Q96T83 725 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 RIT2Q99578 217 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 UNC45AQ9H3U1 944 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 AZI2Q9H6S1 392 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 COL4A6Q14031 1691 aa12.38□□□□□ -0.43
A1CF-208ENST00000414883 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.37□□□□□ -0.43
A1CF-208ENST00000414883 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 STBD1O95210 358 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 NR5A1Q13285 461 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 LPIN1Q14693 890 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 NONOQ15233 471 aaKnown RBP eCLIP12.37□□□□□ -0.43
A1CF-208ENST00000414883 UGCGQ16739 394 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 MIS18BP1Q6P0N0 1132 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 PDXDC2PQ6P474 469 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 KRT25Q7Z3Z0 450 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 C22orf23Q9BZE7 217 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 KCNMB3Q9NPA1 279 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 ZNF302Q9NR11 478 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 MSRAQ9UJ68 235 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 PCDHA10Q9Y5I2 948 aa12.37□□□□□ -0.43
A1CF-208ENST00000414883 C5orf42Q9H799 3197 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 COL4A4P53420 1690 aaPredicted RBP12.36□□□□□ -0.43
A1CF-208ENST00000414883 COL1A2P08123 1366 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 WNT7AO00755 349 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 BACH1O14867 736 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 HBP1O60381 514 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 GJB5O95377 273 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 CA3P07451 260 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
A1CF-208ENST00000414883 IKBKEQ14164 716 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 LRCH2Q5VUJ6 765 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 PPP4R3AQ6IN85 833 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 MTHFD1LQ6UB35 978 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 KIAA0319LQ8IZA0 1049 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 LINC01465Q8N7H1 131 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 HAS1Q92839 578 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
A1CF-208ENST00000414883 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 GABBR1Q9UBS5 961 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 VAV3Q9UKW4 847 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 CDY2AQ9Y6F7 541 aa12.36□□□□□ -0.43
A1CF-208ENST00000414883 BDP1A6H8Y1 2624 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 NCOR1O75376 2440 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 WDR64B1ANS9 1081 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 EML1O00423 815 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 GAS7O60861 476 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 EFCAB14O75071 495 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 C22orf31O95567 290 aa12.35□□□□□ -0.43
A1CF-208ENST00000414883 MMP1P03956 469 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms