RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 IGSF9BQ9UPX0 1349 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 RSPH10B2B2RC85 870 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 RSPH10BP0C881 870 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 ACTN1P12814 892 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 ATP4AP20648 1035 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 TRAPPC10P48553 1259 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 FXR1P51114 621 aaKnown RBP eCLIP28.49■■■□□ 2.15
CPNE1-207ENST00000414664 ORC2Q13416 577 aaPredicted RBP28.49■■■□□ 2.15
CPNE1-207ENST00000414664 MARCH8Q5T0T0 291 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 FTOQ9C0B1 505 aaKnown RBP eCLIP28.49■■■□□ 2.155e-10■□□□□ 9.7
CPNE1-207ENST00000414664 NRBP2Q9NSY0 501 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 CEP131Q9UPN4 1083 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 TANC1Q9C0D5 1861 aa28.49■■■□□ 2.15
CPNE1-207ENST00000414664 RANBP2P49792 3224 aaKnown RBP28.48■■■□□ 2.15
CPNE1-207ENST00000414664 RPAINQ86UA6 219 aa28.48■■■□□ 2.15
CPNE1-207ENST00000414664 HERVK_113Q902F9 699 aa28.48■■■□□ 2.15
CPNE1-207ENST00000414664 VAV3Q9UKW4 847 aa28.48■■■□□ 2.15
CPNE1-207ENST00000414664 K7ELQ4 463 aaPredicted RBP28.47■■■□□ 2.15
CPNE1-207ENST00000414664 LARP1BQ659C4 914 aaKnown RBP28.47■■■□□ 2.15
CPNE1-207ENST00000414664 MCTP1Q6DN14 999 aa28.47■■■□□ 2.15
CPNE1-207ENST00000414664 PCDHA12Q9UN75 941 aa28.47■■■□□ 2.15
CPNE1-207ENST00000414664 PCDHA2Q9Y5H9 948 aa28.47■■■□□ 2.15
CPNE1-207ENST00000414664 KIF28PB7ZC32 967 aa28.46■■■□□ 2.15
CPNE1-207ENST00000414664 DKC1O60832 514 aaKnown RBP eCLIP28.46■■■□□ 2.15
CPNE1-207ENST00000414664 MCM7P33993 719 aa28.46■■■□□ 2.15
CPNE1-207ENST00000414664 TRAF7Q6Q0C0 670 aa28.46■■■□□ 2.15
CPNE1-207ENST00000414664 RUFY4Q6ZNE9 571 aa28.46■■■□□ 2.15
CPNE1-207ENST00000414664 SNX21Q969T3 373 aa28.46■■■□□ 2.15
CPNE1-207ENST00000414664 SCN5AQ14524 2016 aa28.45■■■□□ 2.15
CPNE1-207ENST00000414664 OATP04181 439 aa28.45■■■□□ 2.14
CPNE1-207ENST00000414664 KLRC1P26715 233 aa28.45■■■□□ 2.14
CPNE1-207ENST00000414664 TTC38Q5R3I4 469 aa28.45■■■□□ 2.14
CPNE1-207ENST00000414664 MTHFD1LQ6UB35 978 aa28.45■■■□□ 2.14
CPNE1-207ENST00000414664 OTOP2Q7RTS6 562 aa28.45■■■□□ 2.14
CPNE1-207ENST00000414664 TRMT1LQ7Z2T5 733 aaKnown RBP28.45■■■□□ 2.14
CPNE1-207ENST00000414664 TRAPPC12Q8WVT3 735 aa28.45■■■□□ 2.14
CPNE1-207ENST00000414664 VWCEQ96DN2 955 aa28.45■■■□□ 2.14
CPNE1-207ENST00000414664 INTS4Q96HW7 963 aaKnown RBP28.45■■■□□ 2.14
CPNE1-207ENST00000414664 EML1O00423 815 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 WNT7AO00755 349 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 CXCL10P02778 98 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 PDCP20941 246 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 PSMC5P62195 406 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 PRKCEQ02156 737 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 EPHA7Q15375 998 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 FAM26DQ5JW98 314 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 RASIP1Q5U651 963 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 DNAJB3Q8WWF6 145 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 MTMR9Q96QG7 549 aa28.44■■■□□ 2.14
CPNE1-207ENST00000414664 TTC12Q9H892 705 aaPredicted RBP28.44■■■□□ 2.14
CPNE1-207ENST00000414664 WDR81Q562E7 1941 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 SMIM35A0A1B0GVV1 85 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 ZNF862O60290 1169 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 NBNO60934 754 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 CTSHP09668 335 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 TXKP42681 527 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 GPNMBQ14956 572 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 ZNF174Q15697 407 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 UGCGQ16739 394 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 XKR3Q5GH77 459 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 NCAPH2Q6IBW4 605 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 NME8Q8N427 588 aa28.43■■■□□ 2.14
CPNE1-207ENST00000414664 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-207ENST00000414664 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-207ENST00000414664 SOX1O00570 391 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-207ENST00000414664 MAGEB2O15479 319 aa28.42■■■□□ 2.14
CPNE1-207ENST00000414664 P4HBP07237 508 aaKnown RBP28.42■■■□□ 2.14
CPNE1-207ENST00000414664 QARSP47897 775 aaKnown RBP28.42■■■□□ 2.14
CPNE1-207ENST00000414664 IER5Q5VY09 327 aa28.42■■■□□ 2.14
CPNE1-207ENST00000414664 FAM49AQ9H0Q0 323 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-207ENST00000414664 ZBBXA8MT70 800 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 ZBTB42B2RXF5 422 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 M0QZ92 97 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 BAIAP3O94812 1187 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 SPIRE1Q08AE8 756 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 CNKSR3Q6P9H4 555 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 HSCBQ8IWL3 235 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 BANK1Q8NDB2 785 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 ZBTB10Q96DT7 871 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 TMEM60Q9H2L4 133 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 SLC4A7Q9Y6M7 1214 aa28.41■■■□□ 2.14
CPNE1-207ENST00000414664 OR52Z1P0C646 297 aa28.4■■■□□ 2.14
CPNE1-207ENST00000414664 SMAD3P84022 425 aaKnown RBP28.4■■■□□ 2.14
CPNE1-207ENST00000414664 MBTPS1Q14703 1052 aa28.4■■■□□ 2.14
CPNE1-207ENST00000414664 RILPL1Q5EBL4 403 aa28.4■■■□□ 2.14
CPNE1-207ENST00000414664 GPR153Q6NV75 609 aa28.4■■■□□ 2.14
CPNE1-207ENST00000414664 LRCH3Q96II8 777 aa28.4■■■□□ 2.14
CPNE1-207ENST00000414664 NIFKQ9BYG3 293 aaKnown RBP28.4■■■□□ 2.14
CPNE1-207ENST00000414664 CXXC1Q9P0U4 656 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-207ENST00000414664 C22orf31O95567 290 aa28.39■■■□□ 2.14
CPNE1-207ENST00000414664 CHRNA1P02708 482 aa28.39■■■□□ 2.14
CPNE1-207ENST00000414664 MRPS6P82932 125 aaKnown RBP28.39■■■□□ 2.14
CPNE1-207ENST00000414664 SEPT9Q9UHD8 586 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-207ENST00000414664 DDX11L8A8MPP1 907 aa28.38■■■□□ 2.13
CPNE1-207ENST00000414664 EFCAB14O75071 495 aa28.38■■■□□ 2.13
CPNE1-207ENST00000414664 IKBKEQ14164 716 aa28.38■■■□□ 2.13
CPNE1-207ENST00000414664 NEK9Q8TD19 979 aa28.38■■■□□ 2.13
CPNE1-207ENST00000414664 CDY2AQ9Y6F7 541 aa28.38■■■□□ 2.13
CPNE1-207ENST00000414664 ABHD14A-ACY1A0A1B0GW23 586 aa28.37■■■□□ 2.13
CPNE1-207ENST00000414664 TMOD1P28289 359 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms