RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RPAINQ86UA6 219 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 NME8Q8N427 588 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 HERVK_113Q902F9 699 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 CTAGE1Q96RT6 745 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 PCDHA2Q9Y5H9 948 aa16.55■□□□□ 0.24
CHD1-202ENST00000414220 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 FAM205CA6NFA0 338 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 ZBBXA8MT70 800 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 MAGEB2O15479 319 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 EFCAB14O75071 495 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 OATP04181 439 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 TMOD1P28289 359 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 PSMC5P62195 406 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 CUL4AQ13619 759 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 HIC1Q14526 733 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 TRIM71Q2Q1W2 868 aaKnown RBP16.54■□□□□ 0.24
CHD1-202ENST00000414220 OTOP2Q7RTS6 562 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 TRMT1LQ7Z2T5 733 aaKnown RBP16.54■□□□□ 0.24
CHD1-202ENST00000414220 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 SLC4A7Q9Y6M7 1214 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 DOCK5Q9H7D0 1870 aa16.54■□□□□ 0.24
CHD1-202ENST00000414220 IGSF9BQ9UPX0 1349 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 K7ELQ4 463 aaPredicted RBP16.53■□□□□ 0.24
CHD1-202ENST00000414220 BAIAP3O94812 1187 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
CHD1-202ENST00000414220 U2AF2P26368 475 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHD1-202ENST00000414220 KLRC1P26715 233 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 MCM7P33993 719 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 TXKP42681 527 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 FXR1P51114 621 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHD1-202ENST00000414220 SMAD3P84022 425 aaKnown RBP16.53■□□□□ 0.24
CHD1-202ENST00000414220 EPHA7Q15375 998 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 XKR3Q5GH77 459 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 TTC38Q5R3I4 469 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 NCAPH2Q6IBW4 605 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 GPR153Q6NV75 609 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 CNKSR3Q6P9H4 555 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 MTHFD1LQ6UB35 978 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 C16orf59Q7L2K0 433 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 EXOC8Q8IYI6 725 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 ZNF710Q8N1W2 664 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 GJA10Q969M2 543 aa16.53■□□□□ 0.24
CHD1-202ENST00000414220 INTS4Q96HW7 963 aaKnown RBP16.53■□□□□ 0.24
CHD1-202ENST00000414220 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.24
CHD1-202ENST00000414220 CTSHP09668 335 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 QARSP47897 775 aaKnown RBP16.52■□□□□ 0.24
CHD1-202ENST00000414220 KCNJ6P48051 423 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 PRKCEQ02156 737 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 IKBKEQ14164 716 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 MARCH8Q5T0T0 291 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 B3GNT9Q6UX72 402 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 OTUD6AQ7L8S5 288 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 NEK9Q8TD19 979 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 DNAJB3Q8WWF6 145 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 SEPT8Q92599 483 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 HAS1Q92839 578 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 SNX21Q969T3 373 aa16.52■□□□□ 0.24
CHD1-202ENST00000414220 JPH2Q9BR39 696 aaPredicted RBP16.52■□□□□ 0.24
CHD1-202ENST00000414220 FAM49AQ9H0Q0 323 aaPredicted RBP16.52■□□□□ 0.24
CHD1-202ENST00000414220 TTC12Q9H892 705 aaPredicted RBP16.52■□□□□ 0.24
CHD1-202ENST00000414220 ABHD14A-ACY1A0A1B0GW23 586 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 CXCL10P02778 98 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 ZNF174Q15697 407 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 TMEM266Q2M3C6 531 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 RILPL1Q5EBL4 403 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 FAM26DQ5JW98 314 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 ODR4Q5SWX8 454 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 METTL13Q8N6R0 699 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 USP38Q8NB14 1042 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 APBB2Q92870 758 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 WNT8BQ93098 351 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 SEPT9Q9UHD8 586 aaPredicted RBP16.51■□□□□ 0.23
CHD1-202ENST00000414220 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 PPME1Q9Y570 386 aa16.51■□□□□ 0.23
CHD1-202ENST00000414220 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 NBNO60934 754 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 ATP4AP20648 1035 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 DNM2P50570 870 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 MRPS6P82932 125 aaKnown RBP16.5■□□□□ 0.23
CHD1-202ENST00000414220 TBC1D8BQ0IIM8 1120 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 RUFY4Q6ZNE9 571 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 FAM43BQ6ZT52 329 aaPredicted RBP16.5■□□□□ 0.23
CHD1-202ENST00000414220 BANK1Q8NDB2 785 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 ERMNQ8TAM6 284 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 PHOSPHO2Q8TCD6 241 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 TRAPPC12Q8WVT3 735 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 MTMR9Q96QG7 549 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 SLC9A7Q96T83 725 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 ZSWIM4Q9H7M6 989 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 MSRAQ9UJ68 235 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 STK24Q9Y6E0 443 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
CHD1-202ENST00000414220 LAD1O00515 517 aa16.49■□□□□ 0.23
CHD1-202ENST00000414220 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms