RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 LRCH2Q5VUJ6 765 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 SWSAP1Q6NVH7 229 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 B3GNT9Q6UX72 402 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 CKAP2LQ8IYA6 745 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 FAM184AQ8NB25 1140 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 NSUN7Q8NE18 718 aaKnown RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 FBXO18Q8NFZ0 1043 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 NEK9Q8TD19 979 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 LMBR1Q8WVP7 490 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 LENG9Q96B70 501 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 SCLYQ96I15 445 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 ZFP91Q96JP5 570 aaPredicted RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 RAD9AQ99638 391 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 INO80BQ9C086 356 aaPredicted RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 BCAS3Q9H6U6 928 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 DDX25Q9UHL0 483 aaKnown RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 PCDHA12Q9UN75 941 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 INSL6Q9Y581 213 aa7.21□□□□□ -1.26
USP54-202ENST00000413442 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.21□□□□□ -1.26
USP54-202ENST00000413442 LAD1O00515 517 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 GPR182O15218 404 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 ASAP2O43150 1006 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 ACRP10323 421 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 PTGS1P23219 599 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 DNAJB2P25686 324 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 PSMC5P62195 406 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 PDIA5Q14554 519 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 EPHA7Q15375 998 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 MARCH8Q5T0T0 291 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 TRAF7Q6Q0C0 670 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 MTHFD1LQ6UB35 978 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 TSHZ1Q6ZSZ6 1077 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 OTOP2Q7RTS6 562 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 MIER3Q7Z3K6 550 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 DEFB128Q7Z7B8 93 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 HERC6Q8IVU3 1022 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 C4orf19Q8IY42 314 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 DHX38Q92620 1227 aaKnown RBP7.2□□□□□ -1.26
USP54-202ENST00000413442 TOP1MTQ969P6 601 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 TIFAQ96CG3 184 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 C8orf76Q96K31 380 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 PCYT2Q99447 389 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 KIF2CQ99661 725 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 CELF4Q9BZC1 486 aaKnown RBP7.2□□□□□ -1.26
USP54-202ENST00000413442 ZNF576Q9H609 170 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 KCNMB3Q9NPA1 279 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 KCNG1Q9UIX4 513 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 NOL7Q9UMY1 257 aaKnown RBP7.2□□□□□ -1.26
USP54-202ENST00000413442 TRPC6Q9Y210 931 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 RWDD3Q9Y3V2 267 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 UMODL1Q5DID0 1318 aa7.2□□□□□ -1.26
USP54-202ENST00000413442 SCN5AQ14524 2016 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 EVPLQ92817 2033 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 ZBBXA8MT70 800 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 SOX1O00570 391 aaPredicted RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 EDIL3O43854 480 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 CCNT1O60563 726 aaKnown RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 NBNO60934 754 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 LYPLA2O95372 231 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 GJB5O95377 273 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 CCNE2O96020 404 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 STAG3L1P0CL83 205 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 SKIP12755 728 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 PDCP20941 246 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 U2AF2P26368 475 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP54-202ENST00000413442 QARSP47897 775 aaKnown RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 CRYBB1P53674 252 aaPredicted RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 MRPS6P82932 125 aaKnown RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 SP4Q02446 784 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 POU5F1BQ06416 359 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 GPNMBQ14956 572 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 INF2Q27J81 1249 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 LETM2Q2VYF4 491 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 KRT40Q6A162 431 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 DIS3L2Q8IYB7 885 aaKnown RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 DBF4BQ8NFT6 615 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 ETNPPLQ8TBG4 499 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 TNFRSF25Q93038 417 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 VWCEQ96DN2 955 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 LRCH3Q96II8 777 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 PGBD1Q96JS3 809 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 TBC1D32Q96NH3 1257 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 MAP7D2Q96T17 732 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 GAS2L1Q99501 681 aaPredicted RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 ZBED2Q9BTP6 218 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 PBX4Q9BYU1 374 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 IFIH1Q9BYX4 1025 aaKnown RBP7.19□□□□□ -1.26
USP54-202ENST00000413442 RAB34Q9BZG1 259 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 ZSWIM4Q9H7M6 989 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 C1orf112Q9NSG2 853 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 GABBR1Q9UBS5 961 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 KCNJ14Q9UNX9 436 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 TRPV2Q9Y5S1 764 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 IGSF9BQ9UPX0 1349 aa7.19□□□□□ -1.26
USP54-202ENST00000413442 TRIOBPQ9H2D6 2365 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 BTBD18B2RXH4 712 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 SLC26A4O43511 780 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 TLL1O43897 1013 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 CHRNA1P02708 482 aa7.18□□□□□ -1.26
USP54-202ENST00000413442 OATP04181 439 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms