RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MCOLN1Q9GZU1 580 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 TMEM39BQ9GZU3 492 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 SLC6A17Q9H1V8 727 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 SALL1Q9NSC2 1324 aa6.42□□□□□ -1.38
LINC00342-201ENST00000412393 A0A0G2JLL6 359 aaPredicted RBP6.41□□□□□ -1.38
LINC00342-201ENST00000412393 TBC1D8O95759 1140 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 ZBTB48P10074 688 aaPredicted RBP6.41□□□□□ -1.38
LINC00342-201ENST00000412393 CYP7A1P22680 504 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 INHBEP58166 350 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 DLG4P78352 724 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 RASGRF1Q13972 1273 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 ZNF385BQ569K4 471 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 GORABQ5T7V8 394 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 PHLDB3Q6NSJ2 640 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 FAM83AQ86UY5 434 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 ITPRIPQ8IWB1 547 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 STK35Q8TDR2 534 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 NEUROD6Q96NK8 337 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 CBX8Q9HC52 389 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 ABCF2Q9UG63 623 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 CDK5RAP2Q96SN8 1893 aa6.41□□□□□ -1.38
LINC00342-201ENST00000412393 CCDC85CA6NKD9 419 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 PRR33A8MZF0 331 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 RFXAPO00287 272 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 RLBP1P12271 317 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 ATP8B2P98198 1209 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 TCP10Q12799 353 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 OS9Q13438 667 aaPredicted RBP6.4□□□□□ -1.38
LINC00342-201ENST00000412393 LRRC14Q15048 493 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
LINC00342-201ENST00000412393 CDC42EP5Q6NZY7 148 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 CTU1Q7Z7A3 348 aaKnown RBP6.4□□□□□ -1.38
LINC00342-201ENST00000412393 DZIP1Q86YF9 867 aaKnown RBP6.4□□□□□ -1.38
LINC00342-201ENST00000412393 GLYCTKQ8IVS8 523 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 PIWIL2Q8TC59 973 aaKnown RBP6.4□□□□□ -1.38
LINC00342-201ENST00000412393 SSH3Q8TE77 659 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 FAM151AQ8WW52 585 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 UBE2FQ969M7 185 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 ALKBH8Q96BT7 664 aaKnown RBP6.4□□□□□ -1.38
LINC00342-201ENST00000412393 HOOK2Q96ED9 719 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 CEP44Q9C0F1 390 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 C1orf115Q9H7X2 142 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 ANO2Q9NQ90 1003 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 USP40Q9NVE5 1235 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 CSADQ9Y600 493 aa6.4□□□□□ -1.38
LINC00342-201ENST00000412393 PDS5AQ29RF7 1337 aaKnown RBP6.4□□□□□ -1.39
LINC00342-201ENST00000412393 RPAP1Q9BWH6 1393 aaPredicted RBP6.4□□□□□ -1.39
LINC00342-201ENST00000412393 MAST2Q6P0Q8 1798 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 FKTNO75072 461 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 SURF6O75683 361 aaKnown RBP6.39□□□□□ -1.39
LINC00342-201ENST00000412393 UQCRFS1P1P0C7P4 283 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 FGD1P98174 961 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 VGLL4Q14135 290 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 DCAF15Q66K64 600 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 UBE3DQ7Z6J8 389 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 SPATA5Q8NB90 893 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC00342-201ENST00000412393 PANK1Q8TE04 598 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 ZNF296Q8WUU4 475 aaPredicted RBP6.39□□□□□ -1.39
LINC00342-201ENST00000412393 OPTNQ96CV9 577 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 DMRTB1Q96MA1 342 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 ZNF341Q9BYN7 854 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 R3HDMLQ9H3Y0 253 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 KCNK12Q9HB15 430 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
LINC00342-201ENST00000412393 GPR108Q9NPR9 543 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 HMG20BQ9P0W2 317 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 CNOT6Q9ULM6 557 aaKnown RBP6.39□□□□□ -1.39
LINC00342-201ENST00000412393 ISY1Q9ULR0 285 aaKnown RBP6.39□□□□□ -1.39
LINC00342-201ENST00000412393 GAKO14976 1311 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 ATAD5Q96QE3 1844 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 DOCK1Q14185 1865 aa6.39□□□□□ -1.39
LINC00342-201ENST00000412393 PTPRFP10586 1907 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 DCDC2CA8MYV0 355 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 ENTPD3O75355 529 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 LDHCP07864 332 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 RGS3P49796 1198 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 ARHGAP4P98171 946 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 MECOMQ03112 1051 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 TNNI3KQ59H18 835 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 CCDC158Q5M9N0 1113 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 TTC39AQ5SRH9 613 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 OTUD7BQ6GQQ9 843 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 PI16Q6UXB8 463 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 MIGA2Q7L4E1 593 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 C12orf40Q86WS4 652 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 ERO1BQ86YB8 467 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 HOMEZQ8IX15 550 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 OXR1Q8N573 874 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 PDZD8Q8NEN9 1154 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 ZKSCAN4Q969J2 545 aaPredicted RBP6.38□□□□□ -1.39
LINC00342-201ENST00000412393 NECAB3Q96P71 396 aaPredicted RBP6.38□□□□□ -1.39
LINC00342-201ENST00000412393 WRNIP1Q96S55 665 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 SNCAIPQ9Y6H5 919 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 FPGT-TNNI3KV9GXZ4 949 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 MROH7-TTC4A0A0A0MT08 1334 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 FOCADQ5VW36 1801 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 MYH1P12882 1939 aa6.38□□□□□ -1.39
LINC00342-201ENST00000412393 PHIPQ8WWQ0 1821 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 DNAJC25-GNG10A0A024R161 153 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms