RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 FGAP02671 866 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 TCF3P15923 654 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 ADD1P35611 737 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 USP14P54578 494 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 ADARP55265 1226 aaKnown RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 SPIDRQ14159 915 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 TPTE2Q6XPS3 522 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 RUFY4Q6ZNE9 571 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 MED30Q96HR3 178 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 CIB1Q99828 191 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 CRNNQ9UBG3 495 aaPredicted RBP5.67□□□□□ -1.5
HERC4-205ENST00000412272 ATPIF1Q9UII2 106 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 PCDHB6Q9Y5E3 794 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 MROH1Q8NDA8 1641 aa5.67□□□□□ -1.5
HERC4-205ENST00000412272 VPS37CA5D8V6 355 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 ERVV-2B6SEH9 535 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 WNT7AO00755 349 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ASMTLO95671 621 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 PDHA1P08559 390 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 GNAZP19086 355 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 PSMA3P25788 255 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 SERPINB8P50452 374 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 NNTQ13423 1086 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 INSCQ1MX18 579 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TRIM68Q6AZZ1 485 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 NEK5Q6P3R8 708 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 KLC3Q6P597 504 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 C1orf228Q6PIY5 440 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TMTC1Q8IUR5 882 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 MAP7D3Q8IWC1 876 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ALDH16A1Q8IZ83 802 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 HCAR2Q8TDS4 363 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 PANX2Q96RD6 677 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 KLHL4Q9C0H6 718 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ZSWIM4Q9H7M6 989 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 C12orf10Q9HB07 376 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 SAMSN1Q9NSI8 373 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 FAM184BQ9ULE4 1060 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TTF2Q9UNY4 1162 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 OR5K4A6NMS3 321 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 MUSKO15146 869 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 CCNT1O60563 726 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 PPP1R37O75864 691 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 GSTA1P08263 222 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 MAN1A1P33908 653 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 EVI2BP34910 448 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 SERPINB6P35237 376 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 HSD17B2P37059 387 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 THOP1P52888 689 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 KLHL30Q0D2K2 578 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TTLL12Q14166 644 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 OLFML2BQ68BL8 750 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 AOPEPQ8N6M6 819 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 FLCNQ8NFG4 579 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 OR7G1Q8NGA0 311 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 AENQ8WTP8 325 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 MAML1Q92585 1016 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 CYFIP2Q96F07 1278 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ZNF496Q96IT1 587 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 CCDC87Q9NVE4 849 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 IL1RAPL1Q9NZN1 696 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 PARP4Q9UKK3 1724 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 MAP3K15Q6ZN16 1313 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 WDR17Q8IZU2 1322 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TSPOAP1O95153 1857 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 SPECC1L-ADORA2AF8WAN1 911 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 FBP2O00757 339 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 LARGE1O95461 756 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ATP2A2P16615 1042 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 ACADVLP49748 655 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 GNG11P61952 73 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 RELAQ04206 551 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 PDAP1Q13442 181 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 PPP1R7Q15435 360 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ANKRD39Q53RE8 183 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 MIGA2Q7L4E1 593 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ATP8B4Q8TF62 1192 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 SLC39A13Q96H72 371 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 BTBD6Q96KE9 485 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ACAP3Q96P50 834 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 NELL2Q99435 816 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TDRKHQ9Y2W6 561 aaKnown RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 GPC6Q9Y625 555 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 RIMS2Q9UQ26 1411 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 GOLGA8IPA6NC78 632 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ZW10O43264 779 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 HSD17B4P51659 736 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 ITGB3BPQ13352 177 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 ANKRD1Q15327 319 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TOMM20Q15388 145 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 TAF1CQ15572 869 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 TTMPQ5BVD1 217 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 C6orf132Q5T0Z8 1188 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 KIAA1614Q5VZ46 1190 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 NCAPH2Q6IBW4 605 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 SH3BP5LQ7L8J4 393 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 FMR1NBQ8N0W7 255 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 CRACR2BQ8N4Y2 399 aaPredicted RBP5.66□□□□□ -1.5
HERC4-205ENST00000412272 MIS12Q9H081 205 aa5.66□□□□□ -1.5
HERC4-205ENST00000412272 VCXQ9H320 206 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms