RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 LRRIQ4A6NIV6 560 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 HSPA4LO95757 839 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 CYP2E1P05181 493 aaPredicted RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 KCNA3P22001 575 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 PIK3CAP42336 1068 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 PRCPP42785 496 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 PSMC1P62191 440 aaKnown RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SKOR1P84550 965 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 PROSER3Q2NL68 480 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 DNAJC24Q6P3W2 148 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 NOA1Q8NC60 698 aaKnown RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 RNF169Q8NCN4 708 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 RAPGEF5Q92565 580 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SGSM3Q96HU1 749 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 CHP1Q99653 195 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 PUS7LQ9H0K6 701 aaKnown RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SLC40A1Q9NP59 571 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SCHIP1Q9P0W5 487 aaPredicted RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 TRAF3IP3Q9Y228 551 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 FOXN1O15353 648 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 KDM1AO60341 852 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 HSPA8P11142 646 aaKnown RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 STAT2P52630 851 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 CCNI2Q6ZMN8 369 aaPredicted RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SPATA21Q7Z572 469 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 KIRREL3Q8IZU9 778 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 MARCH10Q8NA82 808 aaPredicted RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 HIC2Q96JB3 615 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SYCE1LA8MT33 242 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 PI4K2BG5E9Z4 385 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SERPINB3P29508 390 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 FOXD4Q12950 439 aaPredicted RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 OLFML2BQ68BL8 750 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 SNRNP27Q8WVK2 155 aaKnown RBP9.8□□□□□ -0.84
POLR1B-203ENST00000409894 KIF2CQ99661 725 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 ARL2BPQ9Y2Y0 163 aa9.8□□□□□ -0.84
POLR1B-203ENST00000409894 EDC4Q6P2E9 1401 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PALM3A6NDB9 673 aaPredicted RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 MIF4GDA9UHW6 222 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 GOLGA8MH3BSY2 632 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PRKAB2O43741 272 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 ZRANB2O95218 330 aaKnown RBP eCLIP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 SYF2O95926 243 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 TNNC2P02585 160 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PRR29P0C7W0 189 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PGM1P36871 562 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 NOP14P78316 857 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 MRPS15P82914 257 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 MED21Q13503 144 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 ZBTB41Q5SVQ8 909 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 GGA1Q9UJY5 639 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PARP3Q9Y6F1 533 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PCDH11XQ9BZA7 1347 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PCDH11YQ9BZA8 1340 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 NEK2P51955 445 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 CTSWP56202 376 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 DMP1Q13316 513 aaPredicted RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 BYSLQ13895 437 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 FAM83BQ5T0W9 1011 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 FBXO11Q86XK2 927 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 USP6NLQ92738 828 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 GEMIN8Q9NWZ8 242 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 TMOD4Q9NZQ9 345 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 LIMA1Q9UHB6 759 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 SNX12Q9UMY4 172 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 GSTA4O15217 222 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 PDE8BO95263 885 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 TMED10P49755 219 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 NR1H3Q13133 447 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 DPP8Q6V1X1 898 aaPredicted RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 CNBD1Q8NA66 436 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 OR2W6PQ8NHA6 318 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.841e-6■■■□□ 17.4
POLR1B-203ENST00000409894 ZNF277Q9NRM2 450 aaPredicted RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 RHBDL2Q9NX52 303 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 ANAPC7Q9UJX3 599 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 HPCAL4Q9UM19 191 aa9.79□□□□□ -0.84
POLR1B-203ENST00000409894 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.79□□□□□ -0.84
POLR1B-203ENST00000409894 SORBS3O60504 671 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 SASH1O94885 1247 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 LIFRP42702 1097 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 KCNJ6P48051 423 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 POLA2Q14181 598 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 TEX2Q8IWB9 1127 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 DNAJC9Q8WXX5 260 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 DTNBP1Q96EV8 351 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 SNX5Q9Y5X3 404 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 RPS8P62241 208 aaKnown RBP9.78□□□□□ -0.84
POLR1B-203ENST00000409894 MFSD14BQ5SR56 506 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 NAIF1Q69YI7 327 aaPredicted RBP9.78□□□□□ -0.84
POLR1B-203ENST00000409894 C4orf50Q6ZRC1 276 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
POLR1B-203ENST00000409894 DACH2Q96NX9 599 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 PRMT1Q99873 361 aaKnown RBP9.78□□□□□ -0.84
POLR1B-203ENST00000409894 ADAM33Q9BZ11 813 aa9.78□□□□□ -0.84
POLR1B-203ENST00000409894 ALG13Q9NP73 1137 aaKnown RBP9.78□□□□□ -0.84
POLR1B-203ENST00000409894 ZNF229Q9UJW7 825 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms