RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DDX39AO00148 427 aaKnown RBP16.76■□□□□ 0.27
CBX3-203ENST00000409747 IPO5O00410 1097 aaKnown RBP16.76■□□□□ 0.27
CBX3-203ENST00000409747 FAM86B2P0C5J1 330 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 KCNQ1P51787 676 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 MIS18BP1Q6P0N0 1132 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 ABHD15Q6UXT9 468 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
CBX3-203ENST00000409747 NME8Q8N427 588 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 MRPL38Q96DV4 380 aaKnown RBP16.76■□□□□ 0.27
CBX3-203ENST00000409747 ZNF577Q9BSK1 485 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 TBC1D22BQ9NU19 505 aa16.76■□□□□ 0.27
CBX3-203ENST00000409747 COL1A2P08123 1366 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 IGLV3-22A0A075B6J6 115 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 HBP1O60381 514 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 PKN1Q16512 942 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 TIGD5Q53EQ6 642 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 TMEM192Q8IY95 271 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
CBX3-203ENST00000409747 FIBCD1Q8N539 461 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 ATP8B4Q8TF62 1192 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 PHKBQ93100 1093 aa16.75■□□□□ 0.27
CBX3-203ENST00000409747 ADGRA3Q8IWK6 1321 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 H3BNC9 293 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 CCNE2O96020 404 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 IFNAR1P17181 557 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 EVCP57679 992 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 GPM6BQ13491 265 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 ZNF746Q6NUN9 644 aaPredicted RBP16.74■□□□□ 0.27
CBX3-203ENST00000409747 PDXDC2PQ6P474 469 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 MTHFD1LQ6UB35 978 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 SLC26A6Q9BXS9 759 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 ZNF302Q9NR11 478 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 IGSF9BQ9UPX0 1349 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 KDM3AQ9Y4C1 1321 aa16.74■□□□□ 0.27
CBX3-203ENST00000409747 ENPP3O14638 875 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 KRT76Q01546 638 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 PAK2Q13177 524 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 NTRK3Q16288 839 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 ZNF484Q5JVG2 852 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 TRAPPC12Q8WVT3 735 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 CELF4Q9BZC1 486 aaKnown RBP16.73■□□□□ 0.27
CBX3-203ENST00000409747 SH3GLB2Q9NR46 395 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 BDP1A6H8Y1 2624 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 DHX15O43143 795 aaKnown RBP16.73■□□□□ 0.27
CBX3-203ENST00000409747 RB1P06400 928 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
CBX3-203ENST00000409747 CD52P31358 61 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 CTNNB1P35222 781 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 CCDC60Q8IWA6 550 aaPredicted RBP16.73■□□□□ 0.27
CBX3-203ENST00000409747 ZBTB10Q96DT7 871 aa16.73■□□□□ 0.27
CBX3-203ENST00000409747 UBE2ZQ9H832 354 aaPredicted RBP16.73■□□□□ 0.27
CBX3-203ENST00000409747 AGO3Q9H9G7 860 aaKnown RBP16.73■□□□□ 0.27
CBX3-203ENST00000409747 TCF20Q9UGU0 1960 aaKnown RBP16.72■□□□□ 0.27
CBX3-203ENST00000409747 C5orf67F2Z3F1 127 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 NEFLP07196 543 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 KLRC1P26715 233 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 CIITAP33076 1130 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 TMEM62Q0P6H9 643 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 PRR16Q569H4 304 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 CKAP2LQ8IYA6 745 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 C11orf84Q9BUA3 381 aaPredicted RBP16.72■□□□□ 0.27
CBX3-203ENST00000409747 RC3H2Q9HBD1 1191 aaKnown RBP16.72■□□□□ 0.27
CBX3-203ENST00000409747 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 CYP46A1Q9Y6A2 500 aa16.72■□□□□ 0.27
CBX3-203ENST00000409747 PSAPP07602 524 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 STAG3L1P0CL83 205 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 TTC3P53804 2025 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 BTG3Q14201 252 aaPredicted RBP16.71■□□□□ 0.27
CBX3-203ENST00000409747 SWSAP1Q6NVH7 229 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 NPAS4Q8IUM7 802 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 BBXQ8WY36 941 aaPredicted RBP16.71■□□□□ 0.27
CBX3-203ENST00000409747 NECAB3Q96P71 396 aaPredicted RBP16.71■□□□□ 0.27
CBX3-203ENST00000409747 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 LMAN2LQ9H0V9 348 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
CBX3-203ENST00000409747 VPS54Q9P1Q0 977 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 PADI3Q9ULW8 664 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 PCDHA10Q9Y5I2 948 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 NCOR1O75376 2440 aa16.71■□□□□ 0.27
CBX3-203ENST00000409747 CPLX1O14810 134 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 DGKIO75912 1065 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 FAM177A1Q8N128 213 aaPredicted RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 BANK1Q8NDB2 785 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 CLP1Q92989 425 aaKnown RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 ZNF689Q96CS4 500 aaPredicted RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 FAM167AQ96KS9 214 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 TM6SF1Q9BZW5 370 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 NCOA5Q9HCD5 579 aaKnown RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 MAFBQ9Y5Q3 323 aaPredicted RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 BMPR1AP36894 532 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 NLRP5P59047 1200 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms