RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 MYOCDQ8IZQ8 938 aa22.22■■□□□ 1.15
TSPAN4-209ENST00000409543 TRAPPC12Q8WVT3 735 aa22.22■■□□□ 1.15
TSPAN4-209ENST00000409543 FAM49AQ9H0Q0 323 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-209ENST00000409543 CERS4Q9HA82 394 aa22.22■■□□□ 1.15
TSPAN4-209ENST00000409543 INSL6Q9Y581 213 aa22.22■■□□□ 1.15
TSPAN4-209ENST00000409543 PCDHA10Q9Y5I2 948 aa22.22■■□□□ 1.15
TSPAN4-209ENST00000409543 MAFBQ9Y5Q3 323 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-209ENST00000409543 TRANK1O15050 2925 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 SMIM35A0A1B0GVV1 85 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 DLL1O00548 723 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 MSH4O15457 936 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 PSAPP07602 524 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 GHRP10912 638 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 POU3F3P20264 500 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 LPIN1Q14693 890 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 FAM117BQ6P1L5 589 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 MTHFD1LQ6UB35 978 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 NME8Q8N427 588 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 ARNTL2Q8WYA1 636 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 RIT2Q99578 217 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 CDY2AQ9Y6F7 541 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 COL1A2P08123 1366 aa22.21■■□□□ 1.15
TSPAN4-209ENST00000409543 CYP3A7-CYP3A51PA0A087WV96 503 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 RFXAPO00287 272 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 SEC24BO95487 1268 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 ATP4AP20648 1035 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 CYP3A7P24462 503 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 KLRC1P26715 233 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 HTRA4P83105 476 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 Q4G0T1 1027 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 ZNF484Q5JVG2 852 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 FBXO47Q5MNV8 452 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 PPM1EQ8WY54 764 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 SLC5A5Q92911 643 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 TOP1MTQ969P6 601 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 PHF20Q9BVI0 1012 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 KCNJ14Q9UNX9 436 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 SQORQ9Y6N5 450 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 SIP14410 1827 aa22.2■■□□□ 1.14
TSPAN4-209ENST00000409543 EPOPA6NHQ4 379 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 WDR64B1ANS9 1081 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 CTDNEP1O95476 244 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 XBP1P17861 261 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 NONOQ15233 471 aaKnown RBP eCLIP22.19■■□□□ 1.149e-6■■■□□ 19
TSPAN4-209ENST00000409543 MOXD1Q6UVY6 613 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 TSHZ1Q6ZSZ6 1077 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 KRT25Q7Z3Z0 450 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 CKAP2LQ8IYA6 745 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 BBXQ8WY36 941 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 SAMM50Q9Y512 469 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 TRPV2Q9Y5S1 764 aa22.19■■□□□ 1.14
TSPAN4-209ENST00000409543 LINC01553A4QN01 128 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 M0QZ92 97 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 GAS7O60861 476 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 NEK4P51957 841 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 ERVK-21P61565 698 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 SPRED2Q7Z698 418 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 MBOAT7Q96N66 472 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 TGS1Q96RS0 853 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 ORC3Q9UBD5 711 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 GABBR1Q9UBS5 961 aa22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 MYH9P35579 1960 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-209ENST00000409543 KDM3AQ9Y4C1 1321 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 ZBTB42B2RXF5 422 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 GTPBP6O43824 516 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 TDP2O95551 362 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 CCDC85BQ15834 202 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 ME3Q16798 604 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 LRCH2Q5VUJ6 765 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 SP7Q8TDD2 431 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 WASF1Q92558 559 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 TEKT3Q9BXF9 490 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 CELF4Q9BZC1 486 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 AGO3Q9H9G7 860 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 DISC1Q9NRI5 854 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 MTCH2Q9Y6C9 303 aa22.17■■□□□ 1.14
TSPAN4-209ENST00000409543 IGSF9BQ9UPX0 1349 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 PSMD10O75832 226 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 SFNP31947 248 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 JAK3P52333 1124 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 TMEM62Q0P6H9 643 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 NECAB1Q8N987 351 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 GTF3C6Q969F1 213 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 FAM167AQ96KS9 214 aa22.16■■□□□ 1.14
TSPAN4-209ENST00000409543 CUL9Q8IWT3 2517 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 ENPP3O14638 875 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 UPP2O95045 317 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 LARGE1O95461 756 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 CD52P31358 61 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 GRB10Q13322 594 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 INF2Q27J81 1249 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 KIAA0319LQ8IZA0 1049 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 YME1L1Q96TA2 773 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 UNC45AQ9H3U1 944 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 PRDM6Q9NQX0 595 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 GJB4Q9NTQ9 266 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 CEP131Q9UPN4 1083 aa22.15■■□□□ 1.14
TSPAN4-209ENST00000409543 CCDC194A0A1B0GVG4 234 aa22.14■■□□□ 1.13
TSPAN4-209ENST00000409543 LPXNO60711 386 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms