RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TRIM59Q8IWR1 403 aa22.83■■□□□ 1.25
USP39-203ENST00000409470 SMCR8Q8TEV9 937 aaPredicted RBP22.83■■□□□ 1.25
USP39-203ENST00000409470 TYW1Q9NV66 732 aaKnown RBP22.83■■□□□ 1.25
USP39-203ENST00000409470 RLFQ13129 1914 aa22.83■■□□□ 1.24
USP39-203ENST00000409470 PLS1Q14651 629 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 DLK2Q6UY11 383 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 CCDC155Q8N6L0 562 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 NEK11Q8NG66 645 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 TEX13BQ9BXU2 312 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 HOXC10Q9NYD6 342 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 TCEAL9Q9UHQ7 104 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 ODF2LQ9ULJ1 636 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 CCND2P30279 289 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 NMT1P30419 496 aaKnown RBP22.82■■□□□ 1.24
USP39-203ENST00000409470 MAP3K9P80192 1104 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 VGLL4Q14135 290 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 SULF1Q8IWU6 871 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 ERO1AQ96HE7 468 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 IRX2Q9BZI1 471 aaPredicted RBP22.82■■□□□ 1.24
USP39-203ENST00000409470 SEL1LQ9UBV2 794 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 FAM184BQ9ULE4 1060 aa22.82■■□□□ 1.24
USP39-203ENST00000409470 EPHB6O15197 1021 aa22.81■■□□□ 1.24
USP39-203ENST00000409470 EIF3DO15371 548 aaKnown RBP eCLIP22.81■■□□□ 1.24
USP39-203ENST00000409470 CYLC1P35663 651 aaPredicted RBP22.81■■□□□ 1.24
USP39-203ENST00000409470 XRRA1Q6P2D8 792 aa22.81■■□□□ 1.24
USP39-203ENST00000409470 RBM46Q8TBY0 533 aaKnown RBP22.81■■□□□ 1.24
USP39-203ENST00000409470 SNCAIPQ9Y6H5 919 aa22.81■■□□□ 1.24
USP39-203ENST00000409470 RPL13P26373 211 aaKnown RBP22.81■■□□□ 1.24
USP39-203ENST00000409470 QARSP47897 775 aaKnown RBP22.81■■□□□ 1.24
USP39-203ENST00000409470 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.81■■□□□ 1.24
USP39-203ENST00000409470 FAM178BQ8IXR5 827 aa22.81■■□□□ 1.24
USP39-203ENST00000409470 ZNF710Q8N1W2 664 aa22.81■■□□□ 1.24
USP39-203ENST00000409470 NHEJ1Q9H9Q4 299 aaPredicted RBP22.81■■□□□ 1.24
USP39-203ENST00000409470 ADM5C9JUS6 153 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 ASTN1O14525 1302 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 ATP2A1O14983 1001 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 NR3C1P04150 777 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 NR3C2P08235 984 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 GUCY2CP25092 1073 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 ZNF131P52739 623 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 NCBP1Q09161 790 aaKnown RBP22.8■■□□□ 1.24
USP39-203ENST00000409470 KCNA1Q09470 495 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 ODR4Q5SWX8 454 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 PADI6Q6TGC4 694 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 STXBP4Q6ZWJ1 553 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 LOXHD1Q8IVV2 1947 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 ACAD9Q9H845 621 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 ARMCX3Q9UH62 379 aaPredicted RBP22.8■■□□□ 1.24
USP39-203ENST00000409470 CSADQ9Y600 493 aa22.8■■□□□ 1.24
USP39-203ENST00000409470 SPDYE16A6NNV3 312 aaPredicted RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 PPP1R12BO60237 982 aaPredicted RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 ATP9AO75110 1047 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 KCNMA1Q12791 1236 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 NAA30Q147X3 362 aaPredicted RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 SH3D19Q5HYK7 790 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 CACNA2D4Q7Z3S7 1137 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 FRMD5Q7Z6J6 570 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 VSIG10LQ86VR7 867 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 CCDC170Q8IYT3 715 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 NSUN6Q8TEA1 469 aaKnown RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 MYPNQ86TC9 1320 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 HIP1RO75146 1068 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 IPO7O95373 1038 aaKnown RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 KRT83P78385 493 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 CDK17Q00537 523 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 ZC2HC1CQ53FD0 456 aaPredicted RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 ZNF569Q5MCW4 686 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 RRAGAQ7L523 313 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 NLRX1Q86UT6 975 aa22.79■■□□□ 1.24
USP39-203ENST00000409470 CCDC43Q96MW1 224 aaKnown RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 REXO2Q9Y3B8 237 aaKnown RBP22.79■■□□□ 1.24
USP39-203ENST00000409470 CLIC2O15247 247 aa22.78■■□□□ 1.24
USP39-203ENST00000409470 JAK3P52333 1124 aa22.78■■□□□ 1.24
USP39-203ENST00000409470 KRT76Q01546 638 aa22.78■■□□□ 1.24
USP39-203ENST00000409470 ZNF720Q7Z2F6 126 aa22.78■■□□□ 1.24
USP39-203ENST00000409470 LSM14BQ9BX40 385 aaKnown RBP22.78■■□□□ 1.24
USP39-203ENST00000409470 EDEM3Q9BZQ6 932 aa22.78■■□□□ 1.24
USP39-203ENST00000409470 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.78■■□□□ 1.24
USP39-203ENST00000409470 DBR1Q9UK59 544 aaKnown RBP22.78■■□□□ 1.24
USP39-203ENST00000409470 PLAGL2Q9UPG8 496 aa22.78■■□□□ 1.24
USP39-203ENST00000409470 V9GYY5 206 aaPredicted RBP22.78■■□□□ 1.24
USP39-203ENST00000409470 WDR64B1ANS9 1081 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 ARHGAP25P42331 645 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 KCNH2Q12809 1159 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 MAEAQ7L5Y9 396 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 GPRASP2Q96D09 838 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 CYP39A1Q9NYL5 469 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 UBE4BO95155 1302 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 LRRC53A6NM62 1247 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 EPB41P11171 864 aaKnown RBP22.77■■□□□ 1.24
USP39-203ENST00000409470 HNRNPH3P31942 346 aaKnown RBP22.77■■□□□ 1.24
USP39-203ENST00000409470 SFNP31947 248 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 ANKRD7Q92527 254 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 CCDC42Q96M95 316 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 FIZ1Q96SL8 496 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 CRACR2AQ9BSW2 395 aa22.77■■□□□ 1.24
USP39-203ENST00000409470 A1CFQ9NQ94 594 aaKnown RBP22.77■■□□□ 1.24
USP39-203ENST00000409470 SLC16A3O15427 465 aaKnown RBP22.76■■□□□ 1.23
USP39-203ENST00000409470 TGFB1I1O43294 461 aa22.76■■□□□ 1.23
USP39-203ENST00000409470 AKAP3O75969 853 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms