RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MGRN1O60291 552 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 GHRP10912 638 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 SYN2Q92777 582 aaPredicted RBP16.89■□□□□ 0.29
LIMS2-205ENST00000409455 NLRC4Q9NPP4 1024 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 CEP72Q9P209 647 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.29
LIMS2-205ENST00000409455 USP17L3A6NCW0 530 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 USP17L4A6NCW7 530 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 M0R2N6 131 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 KCNK3O14649 394 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 PPIP5K2O43314 1243 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 NEBLO76041 1014 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 KIAA0753Q2KHM9 967 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 USP17L1Q7RTZ2 530 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 DDX4Q9NQI0 724 aaKnown RBP16.88■□□□□ 0.29
LIMS2-205ENST00000409455 NOVA2Q9UNW9 492 aaKnown RBP16.88■□□□□ 0.29
LIMS2-205ENST00000409455 MYH1P12882 1939 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 CRKP46108 304 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 CDK8P49336 464 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 PPP2R5AQ15172 486 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 SLC18A3Q16572 532 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 CCT6BQ92526 530 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 FAXDC2Q96IV6 333 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 RSRC1Q96IZ7 334 aaKnown RBP16.88■□□□□ 0.29
LIMS2-205ENST00000409455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.88■□□□□ 0.29
LIMS2-205ENST00000409455 TRIM6Q9C030 488 aaPredicted RBP16.88■□□□□ 0.29
LIMS2-205ENST00000409455 PCDHAC2Q9Y5I4 1007 aa16.88■□□□□ 0.29
LIMS2-205ENST00000409455 OPLAHO14841 1288 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 BACH1O14867 736 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 RASA1P20936 1047 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 PAX7P23759 505 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 BYSLQ13895 437 aaKnown RBP16.87■□□□□ 0.29
LIMS2-205ENST00000409455 RPS6KA1Q15418 735 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 LRCH2Q5VUJ6 765 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 GALNT17Q6IS24 598 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 CDC42EP5Q6NZY7 148 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 C16orf86Q6ZW13 317 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 LAMB1P07942 1786 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 YDJCA8MPS7 323 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-205ENST00000409455 MAGOHP61326 146 aaKnown RBP16.87■□□□□ 0.29
LIMS2-205ENST00000409455 GUF1Q8N442 669 aaKnown RBP16.87■□□□□ 0.29
LIMS2-205ENST00000409455 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 TBC1D5Q92609 795 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 MAGOHBQ96A72 148 aaKnown RBP16.87■□□□□ 0.29
LIMS2-205ENST00000409455 TSG101Q99816 390 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
LIMS2-205ENST00000409455 CNOT8Q9UFF9 292 aaKnown RBP16.87■□□□□ 0.29
LIMS2-205ENST00000409455 FBXL5Q9UKA1 691 aa16.87■□□□□ 0.29
LIMS2-205ENST00000409455 FKBP1AP62942 108 aaKnown RBP16.86■□□□□ 0.29
LIMS2-205ENST00000409455 NAA25Q14CX7 972 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 FAM83BQ5T0W9 1011 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 TLDC1Q6P9B6 456 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 ANKS4BQ8N8V4 417 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 PHF20L1A8MW92 1017 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 ATP6V1G2O95670 118 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 KRT71Q3SY84 523 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 LRRC55Q6ZSA7 311 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 DDX42Q86XP3 938 aaKnown RBP eCLIP16.86■□□□□ 0.29
LIMS2-205ENST00000409455 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 ANKS1AQ92625 1134 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 CHMP6Q96FZ7 201 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 PBKQ96KB5 322 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 CALR3Q96L12 384 aaKnown RBP16.86■□□□□ 0.29
LIMS2-205ENST00000409455 ZDHHC15Q96MV8 337 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 PSMD1Q99460 953 aa16.86■□□□□ 0.29
LIMS2-205ENST00000409455 SCN9AQ15858 1988 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 FRMD3A2A2Y4 597 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 BUB1BO60566 1050 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 TLR2O60603 784 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 RPSAP08865 295 aaKnown RBP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 CALRP27797 417 aaKnown RBP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 SLC8A3P57103 927 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 ELF3P78545 371 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 PPP1R7Q15435 360 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 UNC13DQ70J99 1090 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 NOD2Q9HC29 1040 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 PVALEFA0A1B0GWK0 134 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 SART1O43290 800 aaKnown RBP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 CEP104O60308 925 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 CCNT1O60563 726 aaKnown RBP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 DRD4P21917 467 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 NT5C2P49902 561 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 KCNMA1Q12791 1236 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 NFIAQ12857 509 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 HIBCHQ6NVY1 386 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-205ENST00000409455 CCDC197Q8NCU1 140 aa16.85■□□□□ 0.29
LIMS2-205ENST00000409455 ACTRT1Q8TDG2 376 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms