RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 BRAPQ7Z569 592 aa22.32■■□□□ 1.16
PDLIM2-207ENST00000409417 PCDHB6Q9Y5E3 794 aa22.32■■□□□ 1.16
PDLIM2-207ENST00000409417 TRIP12Q14669 1992 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-207ENST00000409417 KAT6AQ92794 2004 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 A0A1W2PPC1 479 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 IQCF3P0C7M6 154 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 SELPP16109 830 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 EPHA7Q15375 998 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 ZNF484Q5JVG2 852 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 NCAPH2Q6IBW4 605 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 C4orf32Q8N8J7 132 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 NRBP2Q9NSY0 501 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 COL1A2P08123 1366 aa22.31■■□□□ 1.16
PDLIM2-207ENST00000409417 ZBTB42B2RXF5 422 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 CAND2O75155 1236 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 OATP04181 439 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 THPOP40225 353 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 EPHB4P54760 987 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 PSMC5P62195 406 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 PRKCEQ02156 737 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 TRAPPC12Q8WVT3 735 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 SCLYQ96I15 445 aa22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-207ENST00000409417 MYH9P35579 1960 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 P4HBP07237 508 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 RFC2P35250 354 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 QARSP47897 775 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 PTGDRQ13258 359 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 XKR3Q5GH77 459 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 RUFY4Q6ZNE9 571 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 LRRC8DQ7L1W4 858 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 TRMT1LQ7Z2T5 733 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 RPAINQ86UA6 219 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 FERMT3Q86UX7 667 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 BANK1Q8NDB2 785 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 IL23AQ9NPF7 189 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 CEP131Q9UPN4 1083 aa22.29■■□□□ 1.16
PDLIM2-207ENST00000409417 LAD1O00515 517 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 STX6O43752 255 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 PARNO95453 639 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 ZNF618Q5T7W0 954 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 TRAF7Q6Q0C0 670 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 MTHFD1LQ6UB35 978 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 C16orf59Q7L2K0 433 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 RPUSD2Q8IZ73 545 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 TDHQ8IZJ6 230 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 PCDHA2Q9Y5H9 948 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 LAMA3Q16787 3333 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 DKC1O60832 514 aaKnown RBP eCLIP22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 RPLP2P05387 115 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 PDIA4P13667 645 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 KLRC1P26715 233 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 RSPH3Q86UC2 560 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 ZBTB10Q96DT7 871 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 HSD17B14Q9BPX1 270 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 NIFKQ9BYG3 293 aaKnown RBP22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 RGL1Q9NZL6 768 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 MTMR6Q9Y217 621 aa22.28■■□□□ 1.16
PDLIM2-207ENST00000409417 STBD1O95210 358 aa22.27■■□□□ 1.16
PDLIM2-207ENST00000409417 TECP42680 631 aa22.27■■□□□ 1.16
PDLIM2-207ENST00000409417 VWCEQ96DN2 955 aa22.27■■□□□ 1.16
PDLIM2-207ENST00000409417 EIF2AK1Q9BQI3 630 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-207ENST00000409417 LXNQ9BS40 222 aa22.27■■□□□ 1.16
PDLIM2-207ENST00000409417 SMIM35A0A1B0GVV1 85 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 POTEMA6NI47 508 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 RSPH10B2B2RC85 870 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 SLITRK3O94933 977 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 C22orf31O95567 290 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 PFKMP08237 780 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 RSPH10BP0C881 870 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 ACRP10323 421 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 PRPHP41219 470 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 SHHQ15465 462 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 TMEM266Q2M3C6 531 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 C9orf50Q5SZB4 431 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 PSRC1Q6PGN9 363 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 C4orf19Q8IY42 314 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 DNAJB3Q8WWF6 145 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 DYDC2Q96IM9 177 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 ZSWIM4Q9H7M6 989 aa22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 WRAP73Q9P2S5 460 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-207ENST00000409417 DDX11L8A8MPP1 907 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 MAGEB2O15479 319 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 FXR2P51116 673 aaKnown RBP eCLIP22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 CYP4A11Q02928 519 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 RESTQ13127 1097 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 GPNMBQ14956 572 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 TARBP2Q15633 366 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 TMEM240Q5SV17 173 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 ANO5Q75V66 913 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 DEFB128Q7Z7B8 93 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 TPH2Q8IWU9 490 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 NEK9Q8TD19 979 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.25■■□□□ 1.151e-6■■■■□ 19.3
PDLIM2-207ENST00000409417 SEPT9Q9UHD8 586 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 WDR81Q562E7 1941 aa22.25■■□□□ 1.15
PDLIM2-207ENST00000409417 ATP2C1P98194 919 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 CTTNQ14247 550 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 PDIA5Q14554 519 aa22.24■■□□□ 1.15
PDLIM2-207ENST00000409417 HABP4Q5JVS0 413 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 243.7 ms