RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 IFT74Q96LB3 600 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 XPO6Q96QU8 1125 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 EPAS1Q99814 870 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 YIPF3Q9GZM5 350 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 NFU1Q9UMS0 254 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 COL1A1P02452 1464 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 EYA2O00167 538 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 DIAPH2O60879 1101 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 HEXIM1O94992 359 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 FMNL1O95466 1100 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 GLI1P08151 1106 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 GNAT1P11488 350 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 ATP2A2P16615 1042 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 IFNAR1P17181 557 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 ABL2P42684 1182 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 METAP2P50579 478 aaKnown RBP eCLIP11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 PRAMEF18Q5VWM3 479 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 TRPM8Q7Z2W7 1104 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 RALYLQ86SE5 291 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 ERGIC2Q96RQ1 377 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 CCDC28BQ9BUN5 200 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 EDEM3Q9BZQ6 932 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 VPS16Q9H269 839 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 EPB41L5Q9HCM4 733 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 ARHGEF3Q9NR81 526 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 PANK4Q9NVE7 773 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 TMEM59LQ9UK28 342 aa11.61□□□□□ -0.55
NIF3L1-204ENST00000409357 SMIM24O75264 130 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 MYL1P05976 194 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 FAM153BP0C7A2 387 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 FGFR2P21802 821 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 CDC25AP30304 524 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 HIBADHP31937 336 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 CCT6AP40227 531 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 PPP1R2P41236 205 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 PSMC4P43686 418 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 BCAMP50895 628 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 TNNC1P63316 161 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 SLC7A5Q01650 507 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 ZNF844Q08AG5 666 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 SFSWAPQ12872 951 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 FAM153CQ494X1 144 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 NUGGCQ68CJ6 796 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 OGFOD1Q8N543 542 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 KCNV2Q8TDN2 545 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 PLEKHG4BQ96PX9 1271 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 TLR10Q9BXR5 811 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 OSBPL1AQ9BXW6 950 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 GJB4Q9NTQ9 266 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 RBM12Q9NTZ6 932 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 TAB2Q9NYJ8 693 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 LMCD1Q9NZU5 365 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 FAM153AQ9UHL3 310 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 PLAGL2Q9UPG8 496 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
NIF3L1-204ENST00000409357 O00370 1275 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 ZSCAN9O15535 394 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 AOC2O75106 756 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 HSD17B3P37058 310 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 LIFRP42702 1097 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 STX17P56962 302 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 LRRC23Q53EV4 343 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 MFSD14BQ5SR56 506 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 APOA5Q6Q788 366 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 FBXO33Q7Z6M2 555 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 IRF2BP1Q8IU81 584 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 SULF1Q8IWU6 871 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 TEKT4Q8WW24 435 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 CAPNS2Q96L46 248 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 KRT23Q9C075 422 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 CSRNP2Q9H175 543 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 CTNND2Q9UQB3 1225 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 PCDHA13Q9Y5I0 950 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 FAM205AQ6ZU69 1335 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 RBAK-RBAKDNI3L0D1 243 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 CLTAP09496 248 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 GNAZP19086 355 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 HOXA7P31268 230 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 CD151P48509 253 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 LACTBP83111 547 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 ATP11AP98196 1134 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 TFCP2Q12800 502 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 BNIP1Q12981 228 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 PUM3Q15397 648 aaKnown RBP11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 C1QTNF12Q5T7M4 302 aa11.59□□□□□ -0.55
NIF3L1-204ENST00000409357 KLHL10Q6JEL2 608 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms