RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 DDX19AQ9NUU7 478 aaKnown RBP22.91■■□□□ 1.26
VSX1-203ENST00000409285 ERAP1Q9NZ08 941 aa22.91■■□□□ 1.26
VSX1-203ENST00000409285 ZNF215Q9UL58 517 aaPredicted RBP22.91■■□□□ 1.26
VSX1-203ENST00000409285 EVPLQ92817 2033 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 CAPN2P17655 700 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 SYKP43405 635 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 PURAQ00577 322 aaKnown RBP22.9■■□□□ 1.26
VSX1-203ENST00000409285 NAALADL2Q58DX5 795 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 GNASQ5JWF2 1037 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 IQUBQ8NA54 791 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 RASSF8Q8NHQ8 419 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 GLG1Q92896 1179 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 FAM167AQ96KS9 214 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 NACC1Q96RE7 527 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 TSEN34Q9BSV6 310 aaKnown RBP22.9■■□□□ 1.26
VSX1-203ENST00000409285 OGDHLQ9ULD0 1010 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 KIAA1024Q9UPX6 916 aa22.9■■□□□ 1.26
VSX1-203ENST00000409285 POLR2DO15514 142 aaKnown RBP22.89■■□□□ 1.25
VSX1-203ENST00000409285 STBD1O95210 358 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 MBD3O95983 291 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 BEX3Q00994 111 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 PRKCEQ02156 737 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 LRRC41Q15345 812 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 RRAGBQ5VZM2 374 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 TRIM50Q86XT4 487 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 ARRDC4Q8NCT1 418 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 CRISPLD2Q9H0B8 497 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 MAGEF1Q9HAY2 307 aa22.89■■□□□ 1.25
VSX1-203ENST00000409285 H3BRB1 525 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 GJB1P08034 283 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 ZNF286BP0CG31 522 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 LIG1P18858 919 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 ATP4AP20648 1035 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 IRX5P78411 483 aaPredicted RBP22.88■■□□□ 1.25
VSX1-203ENST00000409285 XKR3Q5GH77 459 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 UTP14CQ5TAP6 766 aaKnown RBP22.88■■□□□ 1.25
VSX1-203ENST00000409285 BBXQ8WY36 941 aaPredicted RBP22.88■■□□□ 1.25
VSX1-203ENST00000409285 DEFB118Q96PH6 123 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 KATNAL1Q9BW62 490 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 TUT1Q9H6E5 874 aaKnown RBP22.88■■□□□ 1.25
VSX1-203ENST00000409285 ANKEF1Q9NU02 776 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 BLOC1S4Q9NUP1 217 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 DBR1Q9UK59 544 aaKnown RBP22.88■■□□□ 1.25
VSX1-203ENST00000409285 DNM3Q9UQ16 869 aa22.88■■□□□ 1.25
VSX1-203ENST00000409285 MOXD2PA6NHM9 499 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 HAS3O00219 553 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 OATP04181 439 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 YWHABP31946 246 aaKnown RBP22.87■■□□□ 1.25
VSX1-203ENST00000409285 STAT6P42226 847 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 NFKBIBQ15653 356 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 KCNK18Q7Z418 384 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 PDILTQ8N807 584 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 ATP8B4Q8TF62 1192 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 LRRC15Q8TF66 581 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 KAT2BQ92831 832 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 TIGD1Q96MW7 591 aa22.87■■□□□ 1.25
VSX1-203ENST00000409285 DNM1LO00429 736 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 ACTN4O43707 911 aaKnown RBP22.86■■□□□ 1.25
VSX1-203ENST00000409285 NR1I2O75469 434 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 ZNF202O95125 648 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 SLFN14P0C7P3 912 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 ZRSR1Q15695 479 aaKnown RBP22.86■■□□□ 1.25
VSX1-203ENST00000409285 ANO5Q75V66 913 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 GPT2Q8TD30 523 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 LARP4BQ92615 738 aaKnown RBP22.86■■□□□ 1.25
VSX1-203ENST00000409285 RAD54LQ92698 747 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 MTG1Q9BT17 334 aaPredicted RBP22.86■■□□□ 1.25
VSX1-203ENST00000409285 NIFKQ9BYG3 293 aaKnown RBP22.86■■□□□ 1.25
VSX1-203ENST00000409285 PPME1Q9Y570 386 aa22.86■■□□□ 1.25
VSX1-203ENST00000409285 CABYRO75952 493 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 EYA4O95677 639 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 MYCP01106 439 aaPredicted RBP22.85■■□□□ 1.25
VSX1-203ENST00000409285 ASGR1P07306 291 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 PSMC6P62333 389 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 PLCB4Q15147 1175 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 KCNA10Q16322 511 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 OTUD6AQ7L8S5 288 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 DHX58Q96C10 678 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 SGPL1O95470 568 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 MYL3P08590 195 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 GJA8P48165 433 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 RARRES1P49788 294 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 ELOA2Q8IYF1 753 aaPredicted RBP22.85■■□□□ 1.25
VSX1-203ENST00000409285 SYT2Q8N9I0 419 aaPredicted RBP22.85■■□□□ 1.25
VSX1-203ENST00000409285 U2AF1L4Q8WU68 220 aaKnown RBP22.85■■□□□ 1.25
VSX1-203ENST00000409285 PANK2Q9BZ23 570 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 TNMDQ9H2S6 317 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 KBTBD4Q9NVX7 518 aa22.85■■□□□ 1.25
VSX1-203ENST00000409285 COL1A2P08123 1366 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 E9PMD0 336 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 HBP1O60381 514 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 LONRF3Q496Y0 759 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 TPRNQ4KMQ1 711 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 KRBA2Q6ZNG9 492 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 CKAP2LQ8IYA6 745 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 PIGOQ8TEQ8 1089 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 PLIN2Q99541 437 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 TMEM106CQ9BVX2 250 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 RNPEPQ9H4A4 650 aa22.84■■□□□ 1.25
VSX1-203ENST00000409285 NRBP2Q9NSY0 501 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms