RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CNKSR3Q6P9H4 555 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.98□□□□□ -0.656e-6■■■□□ 19.1
NIF3L1-202ENST00000409020 CRYGNQ8WXF5 182 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 CDHR1Q96JP9 859 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 JPH1Q9HDC5 661 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 MYO9BQ13459 2157 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 IGLV3-22A0A075B6J6 115 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 hCG_1984214I3L0E3 225 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 DDX39AO00148 427 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 MEIS1O00470 390 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 BAIAP3O94812 1187 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 PSMA5P28066 241 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 IGBP1P78318 339 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 STK3Q13188 491 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 KRT40Q6A162 431 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 FAM117BQ6P1L5 589 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 ZNF713Q8N859 430 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 DBF4BQ8NFT6 615 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 TRAPPC12Q8WVT3 735 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 SEPT1Q8WYJ6 367 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 AIFM3Q96NN9 605 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 SLC9A7Q96T83 725 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 ZMYND12Q9H0C1 365 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 SLC9A2Q9UBY0 812 aa10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 ZNF215Q9UL58 517 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-202ENST00000409020 TRIOO75962 3097 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 CCDC196A0A1B0GTZ2 297 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 DLL1O00548 723 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 LGR5O75473 907 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 FOSP01100 380 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 IFNAR1P17181 557 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 IGFBP4P22692 258 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 ACTR2P61160 394 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 TAP1Q03518 808 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 PPFIA1Q13136 1202 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 CCDC85BQ15834 202 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 GRIK4Q16099 956 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 CSPP1Q1MSJ5 1256 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 GLG1Q92896 1179 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 MYCBPQ99417 103 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 EHMT1Q9H9B1 1298 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 KIF3AQ9Y496 699 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 CYP46A1Q9Y6A2 500 aa10.97□□□□□ -0.65
NIF3L1-202ENST00000409020 ESYT2A0FGR8 921 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 DHX15O43143 795 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 TLL1O43897 1013 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 CHRNA1P02708 482 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 KCNJ6P48051 423 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 PLEKHG4Q58EX7 1191 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 ZSCAN30Q86W11 494 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 REXO1Q8N1G1 1221 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 PHOSPHO2Q8TCD6 241 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 TIGD1Q96MW7 591 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 RNF26Q9BY78 433 aaPredicted RBP10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 ERAP1Q9NZ08 941 aa10.96□□□□□ -0.65
NIF3L1-202ENST00000409020 EMSYQ7Z589 1322 aa10.96□□□□□ -0.66
NIF3L1-202ENST00000409020 NRCAMQ92823 1304 aa10.96□□□□□ -0.66
NIF3L1-202ENST00000409020 SEC24BO95487 1268 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 INSRRP14616 1297 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 ZNF76P36508 570 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 MGAT3Q09327 533 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 TMEM62Q0P6H9 643 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 CCDC60Q8IWA6 550 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 DNAJB3Q8WWF6 145 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 ARNTL2Q8WYA1 636 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 GJA10Q969M2 543 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 LENG9Q96B70 501 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 SDF4Q9BRK5 362 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 TM6SF1Q9BZW5 370 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 C6orf50Q9HD87 102 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 PDRG1Q9NUG6 133 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 TUBE1Q9UJT0 475 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 CEP83Q9Y592 693 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 NFASCO94856 1347 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 SIP14410 1827 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 UQCRHLA0A096LP55 91 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 EPB41L2O43491 1005 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 GJB5O95377 273 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 UQCRHP07919 91 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 CYP3A4P08684 503 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 GHRP10912 638 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 SCRN1Q12765 414 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 IKBKEQ14164 716 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 HS1BP3Q53T59 392 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 MICALL1Q8N3F8 863 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 FAM49AQ9H0Q0 323 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 SMARCAD1Q9H4L7 1026 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 GJB4Q9NTQ9 266 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 TPCN1Q9ULQ1 816 aa10.95□□□□□ -0.66
NIF3L1-202ENST00000409020 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms