RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 JAK3P52333 1124 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 ERVK-21P61565 698 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 HTRA4P83105 476 aaPredicted RBP10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 ADGRE1Q14246 886 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 NONOQ15233 471 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 PTPROQ16827 1216 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 KRT25Q7Z3Z0 450 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 BLIDQ8IZY5 108 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 MICALL1Q8N3F8 863 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 RDM1Q8NG50 284 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 DNAJB3Q8WWF6 145 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 PPM1EQ8WY54 764 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 TOP1MTQ969P6 601 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 PCYT2Q99447 389 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 TEKT3Q9BXF9 490 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 BRMS1Q9HCU9 246 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 SAMM50Q9Y512 469 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 CDY2AQ9Y6F7 541 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 KDM3AQ9Y4C1 1321 aa10.28□□□□□ -0.76
SNORD88A-201ENST00000408314 CCDC194A0A1B0GVG4 234 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 MAGEB2O15479 319 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 DHX15O43143 795 aaKnown RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 CCNE2O96020 404 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 CHRNA1P02708 482 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 STAG3L1P0CL83 205 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 GHRP10912 638 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 GCFC2P16383 781 aaKnown RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 TMOD1P28289 359 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 MRPS5P82675 430 aaKnown RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 MGAT3Q09327 533 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 PAK2Q13177 524 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 STK3Q13188 491 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 MKRN4PQ13434 485 aaPredicted RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 LPIN1Q14693 890 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 FBXO47Q5MNV8 452 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 MARCH8Q5T0T0 291 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 LRCH2Q5VUJ6 765 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 SWSAP1Q6NVH7 229 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 RUFY4Q6ZNE9 571 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 CCDC60Q8IWA6 550 aaPredicted RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 SP7Q8TDD2 431 aaPredicted RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 RASGRP4Q8TDF6 673 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 MAP7D2Q96T17 732 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 NRBP2Q9NSY0 501 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 COG5Q9UP83 839 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 TELO2Q9Y4R8 837 aa10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.77
SNORD88A-201ENST00000408314 LINC01553A4QN01 128 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 PFKFB2O60825 505 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 DKC1O60832 514 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 KLRC1P26715 233 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 GRB10Q13322 594 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 Q4G0T1 1027 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 MTHFD1LQ6UB35 978 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 TBCKQ8TEA7 893 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 IL17RAQ96F46 866 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 CELF4Q9BZC1 486 aaKnown RBP10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 CERS4Q9HA82 394 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 DISC1Q9NRI5 854 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 PTPRSQ13332 1948 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 IGSF9BQ9UPX0 1349 aa10.26□□□□□ -0.77
SNORD88A-201ENST00000408314 CYP3A7-CYP3A51PA0A087WV96 503 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 LCHNA4D1U4 455 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 MSH4O15457 936 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 PPFIA3O75145 1194 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 UPP2O95045 317 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 CYP3A7P24462 503 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 CDC42EP1Q00587 391 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 SCRN1Q12765 414 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 TRIM29Q14134 588 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 CCDC85BQ15834 202 aaPredicted RBP10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 TIGD5Q53EQ6 642 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 MIER3Q7Z3K6 550 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 FIBCD1Q8N539 461 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 SLC5A5Q92911 643 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 LENG9Q96B70 501 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 JPH2Q9BR39 696 aaPredicted RBP10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 C1orf112Q9NSG2 853 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 GABBR1Q9UBS5 961 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 SIP14410 1827 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 ADGRA3Q8IWK6 1321 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 A0A0C4DFX4 3053 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 CDH23Q9H251 3354 aa10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 MYH9P35579 1960 aaKnown RBP10.25□□□□□ -0.77
SNORD88A-201ENST00000408314 CHD7Q9P2D1 2997 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 GPR182O15218 404 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 MARCH6O60337 910 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 RPS6KA5O75582 802 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 C22orf31O95567 290 aa10.24□□□□□ -0.77
SNORD88A-201ENST00000408314 OATP04181 439 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms