RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PRAMEF25A6NGN4 478 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 SLC27A2O14975 620 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 EIF3JO75822 258 aaKnown RBP6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 TGFB1P01137 390 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 LTFP02788 710 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 GLI4P10075 376 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 HSPA6P17066 643 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 TACR1P25103 407 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 HOXA10P31260 410 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 SSTR4P31391 388 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 RHBDL3P58872 404 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 TUSC3Q13454 348 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 TCIRG1Q13488 830 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 ACAP2Q15057 778 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 BRD3Q15059 726 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 TIGD7Q6NT04 549 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 ESRP1Q6NXG1 681 aaKnown RBP6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 SLC23A3Q6PIS1 610 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 SLC4A10Q6U841 1118 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 ESPNLQ6ZVH7 1005 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 CMTR2Q8IYT2 770 aaKnown RBP6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 TTLL11Q8NHH1 800 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 ORAI2Q96SN7 254 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 ZNF700Q9H0M5 742 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 CSRNP2Q9H175 543 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 CCM2LQ9NUG4 571 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 MSRAQ9UJ68 235 aa6.13□□□□□ -1.43
HMGB3P18-201ENST00000406327 VSTM5A8MXK1 200 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 SRGAP3O43295 1099 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 ZBTB7AO95365 584 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 ENPP1P22413 925 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 AKAP5P24588 427 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 PTX3P26022 381 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 GPR3P46089 330 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 HK2P52789 917 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 PURAQ00577 322 aaKnown RBP6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 FSCN1Q16658 493 aaKnown RBP6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 MAP9Q49MG5 647 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 RAX2Q96IS3 184 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 C16orf92Q96LL3 132 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 NMRK2Q9NPI5 230 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 DNAJC28Q9NX36 388 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 OBP2AQ9NY56 170 aa6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 ANGEL1Q9UNK9 670 aaKnown RBP6.12□□□□□ -1.43
HMGB3P18-201ENST00000406327 DCAF1Q9Y4B6 1507 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 ST20-MTHFSA0A0A6YYL1 179 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 MAFGO15525 162 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 CYBBP04839 570 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 CD8BP10966 210 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 CD97P48960 835 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 BNIP3Q12983 259 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 SLC9A5Q14940 896 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 CXorf67Q86X51 503 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 TPH2Q8IWU9 490 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 MIER2Q8N344 545 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 SAMD3Q8N6K7 520 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 FERMT2Q96AC1 680 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 TTC17Q96AE7 1141 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 RPS6KC1Q96S38 1066 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 EBF1Q9UH73 591 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 ASB1Q9Y576 335 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 COMMD10Q9Y6G5 202 aa6.11□□□□□ -1.43
HMGB3P18-201ENST00000406327 UBA6A0AVT1 1052 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 H2AFYO75367 372 aaKnown RBP6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 HPXP02790 462 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 C4BPAP04003 597 aaKnown RBP6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 MSL3P1P0C860 447 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 PNLIPP16233 465 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 GDNFP39905 211 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 CD96P40200 585 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 SLC5A3P53794 718 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 MRPS9P82933 396 aaKnown RBP6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 TMEM62Q0P6H9 643 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 NR1I3Q14994 352 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 UGT8Q16880 541 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 TTC38Q5R3I4 469 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 CATSPEREQ5SY80 951 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 PAQR3Q6TCH7 311 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 KSR2Q6VAB6 950 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 MILR1Q7Z6M3 343 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 AGBL5Q8NDL9 886 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 HIPK4Q8NE63 616 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 FLCNQ8NFG4 579 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 RSAD2Q8WXG1 361 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 RTF1Q92541 710 aaKnown RBP6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 PMM1Q92871 262 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 TEKT5Q96M29 485 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 RC3H2Q9HBD1 1191 aaKnown RBP6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 FBLN5Q9UBX5 448 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 GPR160Q9UJ42 338 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 DBR1Q9UK59 544 aaKnown RBP6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 PALD1Q9ULE6 856 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 GPR45Q9Y5Y3 372 aa6.1□□□□□ -1.43
HMGB3P18-201ENST00000406327 FAM90A27PA6NNH2 459 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 OFD1O75665 1012 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 FUT4P22083 530 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 ADKP55263 362 aaKnown RBP6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 GBX1Q14549 363 aa6.09□□□□□ -1.43
HMGB3P18-201ENST00000406327 PDCD1Q15116 288 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms