RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SNHG28P0DPA3 235 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 CLK2P49760 499 aaKnown RBP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 B4GALNT4Q76KP1 1039 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 GPC2Q8N158 579 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 EIF1ADQ8N9N8 165 aaKnown RBP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 IPO4Q8TEX9 1081 aaKnown RBP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 CASKIN2Q8WXE0 1202 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 IFT81Q8WYA0 676 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 HAS1Q92839 578 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 KRT12Q99456 494 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 NT5C3AQ9H0P0 336 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 CNOT7Q9UIV1 285 aaKnown RBP21.74■■□□□ 1.07
CCDC47-202ENST00000403162 PCDHA2Q9Y5H9 948 aa21.74■■□□□ 1.07
CCDC47-202ENST00000403162 A0A087X0T9 212 aa21.73■■□□□ 1.07
CCDC47-202ENST00000403162 FAM228BP0C875 321 aa21.73■■□□□ 1.07
CCDC47-202ENST00000403162 MYBP10242 640 aa21.73■■□□□ 1.07
CCDC47-202ENST00000403162 ZNF280AP59817 542 aaPredicted RBP21.73■■□□□ 1.07
CCDC47-202ENST00000403162 KIAA0753Q2KHM9 967 aa21.73■■□□□ 1.07
CCDC47-202ENST00000403162 RBM26Q5T8P6 1007 aaKnown RBP21.73■■□□□ 1.07
CCDC47-202ENST00000403162 TTC19Q6DKK2 380 aaPredicted RBP21.73■■□□□ 1.07
CCDC47-202ENST00000403162 SPATS2Q86XZ4 545 aaKnown RBP21.73■■□□□ 1.07
CCDC47-202ENST00000403162 SUGP1Q8IWZ8 645 aaKnown RBP21.73■■□□□ 1.07
CCDC47-202ENST00000403162 SH2D3CQ8N5H7 860 aa21.73■■□□□ 1.07
CCDC47-202ENST00000403162 GANQ9H2C0 597 aa21.73■■□□□ 1.07
CCDC47-202ENST00000403162 DDX25Q9UHL0 483 aaKnown RBP21.73■■□□□ 1.07
CCDC47-202ENST00000403162 TMEM59LQ9UK28 342 aa21.73■■□□□ 1.07
CCDC47-202ENST00000403162 ESYT3A0FGR9 886 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 CLRN2A0PK11 232 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 TNNI2P48788 182 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 TNNC1P63316 161 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 KLHL30Q0D2K2 578 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 TCP10Q12799 353 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 RAPGEF1Q13905 1077 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 CCDC65Q8IXS2 484 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 USP38Q8NB14 1042 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 MTMR14Q8NCE2 650 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 MTMR4Q9NYA4 1195 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 TMOD2Q9NZR1 351 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 MYH7BA7E2Y1 1941 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 NDUFAB1O14561 156 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 GCFC2P16383 781 aaKnown RBP21.72■■□□□ 1.07
CCDC47-202ENST00000403162 MMP14P50281 582 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 ASIC2Q16515 512 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 C10orf76Q5T2E6 689 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 IDI2Q9BXS1 227 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 KCTD10Q9H3F6 313 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 RABEP2Q9H5N1 569 aa21.72■■□□□ 1.07
CCDC47-202ENST00000403162 PNMA6FA0A0J9YX94 578 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 SLC26A4O43511 780 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 LIG3P49916 1009 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 KCTD16Q68DU8 428 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 MMS22LQ6ZRQ5 1243 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 PAGR1Q9BTK6 254 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 FGFBP2Q9BYJ0 223 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 ZNF70Q9UC06 446 aaPredicted RBP21.71■■□□□ 1.07
CCDC47-202ENST00000403162 HSPA9P38646 679 aaKnown RBP21.71■■□□□ 1.07
CCDC47-202ENST00000403162 PPP4R3CPQ6ZMV5 832 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.71■■□□□ 1.07
CCDC47-202ENST00000403162 FAM198AQ9UFP1 575 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 ADAMTS1Q9UHI8 967 aa21.71■■□□□ 1.07
CCDC47-202ENST00000403162 MYH4Q9Y623 1939 aa21.7■■□□□ 1.07
CCDC47-202ENST00000403162 DDNO94850 711 aaPredicted RBP21.7■■□□□ 1.06
CCDC47-202ENST00000403162 INPP5BP32019 993 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 LSP1P33241 339 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 EDRF1Q3B7T1 1238 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 SAMD7Q7Z3H4 446 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 ZFPM1Q8IX07 1006 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 FAM133AQ8N9E0 248 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 RNPC3Q96LT9 517 aaKnown RBP21.7■■□□□ 1.06
CCDC47-202ENST00000403162 PACSIN1Q9BY11 444 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 EPN3Q9H201 632 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 PCDHA12Q9UN75 941 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 HMGB1P1B2RPK0 211 aaPredicted RBP21.7■■□□□ 1.06
CCDC47-202ENST00000403162 WNT10BO00744 389 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 RAD51CO43502 376 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 EGFRP00533 1210 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 NR1D1P20393 614 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 ATP1A2P50993 1020 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 GUCY2FP51841 1108 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 UBE2SQ16763 222 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 NBPF9Q3BBW0 867 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 TBC1D10BQ4KMP7 808 aaPredicted RBP21.7■■□□□ 1.06
CCDC47-202ENST00000403162 SCFD1Q8WVM8 642 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 TAF4BQ92750 862 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 CUL5Q93034 780 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 ZBED3Q96IU2 234 aaPredicted RBP21.7■■□□□ 1.06
CCDC47-202ENST00000403162 ATP6V1G3Q96LB4 118 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 TAF1DQ9H5J8 278 aaPredicted RBP21.7■■□□□ 1.06
CCDC47-202ENST00000403162 PACSIN2Q9UNF0 486 aaPredicted RBP21.7■■□□□ 1.06
CCDC47-202ENST00000403162 SAMM50Q9Y512 469 aa21.7■■□□□ 1.06
CCDC47-202ENST00000403162 IGKV6D-41A0A0C4DH26 115 aa21.69■■□□□ 1.06
CCDC47-202ENST00000403162 SRRM3A6NNA2 597 aaPredicted RBP21.69■■□□□ 1.06
CCDC47-202ENST00000403162 TCP10L2B9ZVM9 353 aa21.69■■□□□ 1.06
CCDC47-202ENST00000403162 DNA2P51530 1060 aa21.69■■□□□ 1.06
CCDC47-202ENST00000403162 SPDYE2Q495Y8 402 aa21.69■■□□□ 1.06
CCDC47-202ENST00000403162 NELFCDQ8IXH7 590 aa21.69■■□□□ 1.06
CCDC47-202ENST00000403162 NAP1L4Q99733 375 aaKnown RBP21.69■■□□□ 1.06
CCDC47-202ENST00000403162 ISCUQ9H1K1 167 aa21.69■■□□□ 1.06
CCDC47-202ENST00000403162 JMJD4Q9H9V9 463 aa21.69■■□□□ 1.06
CCDC47-202ENST00000403162 VEZTQ9HBM0 779 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms