RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 SNX12Q9UMY4 172 aa18.65■□□□□ 0.58
DNMT3A-205ENST00000402667 L1RE1Q9UN81 338 aa18.65■□□□□ 0.58
DNMT3A-205ENST00000402667 ASTN1O14525 1302 aa18.64■□□□□ 0.58
DNMT3A-205ENST00000402667 MYH10P35580 1976 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 ATAD5Q96QE3 1844 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 PDE2AO00408 941 aaPredicted RBP18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 AKAP3O75969 853 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 GAP43P17677 238 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 KCNA1Q09470 495 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 WDR93Q6P2C0 686 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 NIM1KQ8IY84 436 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 ANKRD13CQ8N6S4 541 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 VPS33BQ9H267 617 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 KIF13BQ9NQT8 1826 aa18.64■□□□□ 0.57
DNMT3A-205ENST00000402667 NR3C1P04150 777 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 ARP10275 920 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 RAPGEF1Q13905 1077 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 NBPF9Q3BBW0 867 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 DPY19L2P1Q6NXN4 242 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 ZBED3Q96IU2 234 aaPredicted RBP18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 DRC1Q96MC2 740 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 AIPL1Q9NZN9 384 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 WNT10BO00744 389 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 FAM13AO94988 1023 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 AFPP02771 609 aaKnown RBP18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 ASNSP08243 561 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 RPL13P26373 211 aaKnown RBP18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 MAP3K10Q02779 954 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 CXCL9Q07325 125 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 HDXQ7Z353 690 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 CAGE1Q8TC20 777 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 ZNF577Q9BSK1 485 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 GBP3Q9H0R5 595 aa18.63■□□□□ 0.57
DNMT3A-205ENST00000402667 CLIC2O15247 247 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 ACTN1P12814 892 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 XRCC5P13010 732 aaKnown RBP18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 PRLRP16471 622 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 SLC9A1P19634 815 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 INPP5BP32019 993 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 PTGER2P43116 358 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 CASP4P49662 377 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 TXLNBQ8N3L3 684 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 MYCT1Q8N699 235 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 ALS2CR12Q96Q35 445 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 UNC45AQ9H3U1 944 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 SUGCTQ9HAC7 445 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 TGFB1I1O43294 461 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 ARID5AQ03989 594 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 CREG2Q8IUH2 290 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 FAM133AQ8N9E0 248 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 AGBL1Q96MI9 1066 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 WDR11Q9BZH6 1224 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 DEFB129Q9H1M3 183 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 METTL14Q9HCE5 456 aaKnown RBP18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 PLCB1Q9NQ66 1216 aa18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 WRAP73Q9P2S5 460 aaPredicted RBP18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 ZHX1Q9UKY1 873 aaPredicted RBP18.62■□□□□ 0.57
DNMT3A-205ENST00000402667 MUTP22033 750 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 OAS2P29728 719 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 NMT1P30419 496 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 NACC1Q96RE7 527 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 SCAF8Q9UPN6 1271 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 POLR3GO15318 223 aaPredicted RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 EIF3DO15371 548 aaKnown RBP eCLIP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 SLC16A3O15427 465 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 EPB41P11171 864 aaKnown RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 PON1P27169 355 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 SETQ01105 290 aaPredicted RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 KLHL30Q0D2K2 578 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 EPHA7Q15375 998 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 ASIC2Q16515 512 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 SLC18A3Q16572 532 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 EXOC3L4Q17RC7 722 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 DCAF17Q5H9S7 520 aaPredicted RBP18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 B3GNT9Q6UX72 402 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 COG1Q8WTW3 980 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 ZNF341Q9BYN7 854 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 PARVGQ9HBI0 331 aa18.61■□□□□ 0.57
DNMT3A-205ENST00000402667 IPO5O00410 1097 aaKnown RBP18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 ICAM1P05362 532 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 HSD17B4P51659 736 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 ZC2HC1CQ53FD0 456 aaPredicted RBP18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 KLHDC7AQ5VTJ3 777 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 ZNF771Q7L3S4 317 aaPredicted RBP18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 MXRA8Q9BRK3 442 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 TEKT3Q9BXF9 490 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 IKZF4Q9H2S9 585 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 ZCCHC17Q9NP64 241 aaKnown RBP18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 CCPG1Q9ULG6 757 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 ZNF536O15090 1300 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 ZMYM2Q9UBW7 1377 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 A0A087X0T9 212 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 SHTN1A0MZ66 631 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 PHF20L1A8MW92 1017 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 BUB1O43683 1085 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 FAM228BP0C875 321 aa18.6■□□□□ 0.57
DNMT3A-205ENST00000402667 UCHL3P15374 230 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms